RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 HRH1P35367 487 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 CASRP41180 1078 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 RAC3P60763 192 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 PMPCAQ10713 525 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 GLT8D1Q68CQ7 371 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF774Q6NX45 483 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 SLC25A47Q6Q0C1 308 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 AAED1Q7RTV5 226 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 GCNT2Q8N0V5 402 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 OR10Z1Q8NGY1 313 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 DCUN1D4Q92564 292 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 USB1Q9BQ65 265 aaKnown RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 PRRG4Q9BZD6 226 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 CNTD2Q9H8S5 307 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 PRELID3BQ9Y3B1 194 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 FLVCR1Q9Y5Y0 555 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 ATRXP46100 2492 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 BSNQ9UPA5 3926 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 COL5A1P20908 1838 aaPredicted RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 LOC100289279A0A1B0GTE1 492 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 C3orf80F5H4A9 247 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 TERTO14746 1132 aaKnown RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 PHYHO14832 338 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 DHHO43323 396 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 SRSF10O75494 262 aaKnown RBP6.66□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF205O95201 554 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 HTR3BO95264 441 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 IGHEP01854 428 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 SPP1P10451 314 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 MGMTP16455 207 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 RAB3AP20336 220 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 HTR2CP28335 458 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 IL13RA1P78552 427 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 CEACAM16Q2WEN9 425 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 SNAI3Q3KNW1 292 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 ALKBH2Q6NS38 261 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 C11orf87Q6NUJ2 197 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 H3F3CQ6NXT2 135 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 TRAPPC6BQ86SZ2 158 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 FJX1Q86VR8 437 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 RPS4Y2Q8TD47 263 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 MRGPRFQ96AM1 343 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 TMEM41AQ96HV5 264 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 NICN1Q9BSH3 213 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 BANF2Q9H503 90 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 ETV7Q9Y603 341 aa6.66□□□□□ -1.34
TRIM55-202ENST00000315962 TRBV5-7A0A0A0MS05 114 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 TUBAL3A6NHL2 446 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 C21orf140B9A014 251 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 EIF1BO60739 113 aaKnown RBP6.65□□□□□ -1.34
TRIM55-202ENST00000315962 ERCC1P07992 297 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-202ENST00000315962 FAHP16930 419 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 RBMXP38159 391 aaKnown RBP6.65□□□□□ -1.34
TRIM55-202ENST00000315962 MEOX1P50221 254 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 NPY4RP50391 375 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 AIMP2Q13155 320 aaKnown RBP6.65□□□□□ -1.34
TRIM55-202ENST00000315962 RSPO1Q2MKA7 263 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-202ENST00000315962 DEFB109BQ30KR1 87 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 TSPO2Q5TGU0 170 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 SLC16A13Q7RTY0 426 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF584Q8IVC4 421 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 TMEM123Q8N131 208 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 OR5M8Q8NGP6 311 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 OR51F2Q8NH61 342 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 MARCH1Q8TCQ1 289 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 GPX8Q8TED1 209 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 RRNAD1Q96FB5 475 aaKnown RBP6.65□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF703Q9H7S9 590 aaPredicted RBP6.65□□□□□ -1.34
TRIM55-202ENST00000315962 PNRC2Q9NPJ4 139 aaKnown RBP6.65□□□□□ -1.34
TRIM55-202ENST00000315962 TNFSF18Q9UNG2 199 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 ZNF175Q9Y473 711 aa6.65□□□□□ -1.34
TRIM55-202ENST00000315962 ROS1P08922 2347 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 A0A087WZY1 265 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 IGHV3-64DA0A0J9YX35 117 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF878C9JN71 531 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 TM4SF5O14894 197 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 BCL2L11O43521 198 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 NDUFA2O43678 99 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF432O94892 652 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF735P0CB33 412 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 UBBP0CG47 229 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 UBCP0CG48 685 aaKnown RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 ZNF17P17021 662 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 RCC1P18754 421 aaPredicted RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 SERPINF1P36955 418 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 MMP16P51512 607 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 GFRA1P56159 465 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 TAS2R19P59542 299 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 RPS27AP62979 156 aaKnown RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 UBA52P62987 128 aaKnown RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 MRPS10P82664 201 aaKnown RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 HGFACQ04756 655 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 FGL1Q08830 312 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 EIF3IQ13347 325 aaKnown RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 ENDOGQ14249 297 aaKnown RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 HFEQ30201 348 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 RBMS3Q6XE24 437 aaKnown RBP6.65□□□□□ -1.35
TRIM55-202ENST00000315962 OR2V1Q8NHB1 315 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 THAP6Q8TBB0 222 aa6.65□□□□□ -1.35
TRIM55-202ENST00000315962 NAA11Q9BSU3 229 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms