RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 OR52N1Q8NH53 320 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 OR5AK2Q8NH90 309 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 TRMT10AQ8TBZ6 339 aaKnown RBP6.62□□□□□ -1.35
CDC42-201ENST00000315554 OR5P3Q8WZ94 311 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 RGP1Q92546 391 aaPredicted RBP6.62□□□□□ -1.35
CDC42-201ENST00000315554 RPL3LQ92901 407 aaKnown RBP6.62□□□□□ -1.35
CDC42-201ENST00000315554 MYDGFQ969H8 173 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 FGGYQ96C11 551 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 ADAT3Q96EY9 351 aaPredicted RBP6.62□□□□□ -1.35
CDC42-201ENST00000315554 RNF170Q96K19 258 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 C18orf12Q96KH6 178 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 COX4I2Q96KJ9 171 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 HIST1H2AAQ96QV6 131 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 OR5M11Q96RB7 305 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 MICU1Q9BPX6 476 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 RTL8AQ9BWD3 113 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 SLC22A4Q9H015 551 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 Q9H521 79 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 PLEKHA1Q9HB21 404 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 DLL4Q9NR61 685 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 BABAM2Q9NXR7 383 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 TPRKBQ9Y3C4 175 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 WIPI2Q9Y4P8 454 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 MPC1Q9Y5U8 109 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 F8P00451 2351 aa6.62□□□□□ -1.35
CDC42-201ENST00000315554 FAM230AA0A1W2PPH8 454 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 ZNF732B4DXR9 585 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 F5H0A9 414 aaPredicted RBP6.61□□□□□ -1.35
CDC42-201ENST00000315554 TMEM178BH3BS89 294 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 NDUFS8O00217 210 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 CDIPTO14735 213 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 DENRO43583 198 aaKnown RBP6.61□□□□□ -1.35
CDC42-201ENST00000315554 RGS10O43665 173 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 NRASP01111 189 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 INHBBP09529 407 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 ZNF20P17024 532 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 EGR1P18146 543 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 EEF1B2P24534 225 aaKnown RBP6.61□□□□□ -1.35
CDC42-201ENST00000315554 TGM4P49221 684 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 WNT4P56705 351 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 TMEM33P57088 247 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 CHD3Q12873 2000 aaKnown RBP6.61□□□□□ -1.35
CDC42-201ENST00000315554 ZNF154Q13106 437 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 CDK5R1Q15078 307 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 ZMYND11Q15326 602 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 CLVS2Q5SYC1 327 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 LCE1DQ5T752 114 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 RPL22L1Q6P5R6 122 aaKnown RBP6.61□□□□□ -1.35
CDC42-201ENST00000315554 C11orf53Q8IXP5 236 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 FTMTQ8N4E7 242 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 NANOGP1Q8N7R0 232 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 ZNF485Q8NCK3 441 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 DEFB108BQ8NET1 73 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 CLDND2Q8NHS1 167 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 TSEN15Q8WW01 171 aaKnown RBP6.61□□□□□ -1.35
CDC42-201ENST00000315554 ORAI1Q96D31 301 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 SEH1LQ96EE3 360 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 COMMD4Q9H0A8 199 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 DUSP21Q9H596 190 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 FN3KRPQ9HA64 309 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 C14orf119Q9NWQ9 140 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 CELSR1Q9NYQ6 3014 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 HHLA2Q9UM44 414 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 ERGIC3Q9Y282 383 aa6.61□□□□□ -1.35
CDC42-201ENST00000315554 NOP16Q9Y3C1 178 aaKnown RBP6.61□□□□□ -1.35
CDC42-201ENST00000315554 IGHV3OR15-7A0A075B7D8 119 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 ANKRD61A6NGH8 418 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 OGG1O15527 345 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 PLATP00750 562 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 IGHV2-70P01814 119 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 TFF1P04155 84 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 IRF2P14316 349 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 GATA4P43694 442 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 CDH15P55291 814 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 IRF3Q14653 427 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 MED22Q15528 200 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 UBE2V2Q15819 145 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 CEACAM21Q3KPI0 293 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 RBM48Q5RL73 367 aaKnown RBP6.6□□□□□ -1.35
CDC42-201ENST00000315554 SFRP4Q6FHJ7 346 aaPredicted RBP6.6□□□□□ -1.35
CDC42-201ENST00000315554 Q6ZSR3 168 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 RNF144BQ7Z419 303 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 ANGPTL5Q86XS5 388 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 SCCPDHQ8NBX0 429 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 OR13C9Q8NGT0 318 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 OR11L1Q8NGX0 322 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 LRRC29Q8WV35 223 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 GHSRQ92847 366 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 RAB1CQ92928 201 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 TIMD4Q96H15 378 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 ZNF488Q96MN9 340 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 CLUHP3Q96NS8 147 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 GAL3ST1Q99999 423 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 MND1Q9BWT6 205 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 CDCA4Q9BXL8 241 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 LPAR2Q9HBW0 351 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 TRIM36Q9NQ86 728 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 RNF7Q9UBF6 113 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 EXTL2Q9UBQ6 330 aa6.6□□□□□ -1.35
CDC42-201ENST00000315554 LSM2Q9Y333 95 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms