RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 LPAR5Q9H1C0 372 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 POFUT1Q9H488 388 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 GPR35Q9HC97 309 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 SLC7A10Q9NS82 523 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 TAS2R8Q9NYW2 309 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 KCNK7Q9Y2U2 307 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 PRELID3BQ9Y3B1 194 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 NBEAQ8NFP9 2946 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 ANGPTL7O43827 346 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 MRPL33O75394 65 aaKnown RBP10.84□□□□□ -0.67
RNF4-201ENST00000314289 MTRF1O75570 445 aaKnown RBP10.84□□□□□ -0.67
RNF4-201ENST00000314289 BPNT1O95861 308 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 MPGP29372 298 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 MEOX1P50221 254 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 LUMP51884 338 aaPredicted RBP10.84□□□□□ -0.67
RNF4-201ENST00000314289 CLDN18P56856 261 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 TAS2R19P59542 299 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 RIPPLY1Q0D2K3 151 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 SPTSSAQ969W0 71 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 UQCC2Q9BRT2 126 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 NKX6-2Q9C056 277 aaPredicted RBP10.84□□□□□ -0.67
RNF4-201ENST00000314289 ABI3Q9P2A4 366 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 ZNF175Q9Y473 711 aa10.84□□□□□ -0.67
RNF4-201ENST00000314289 FAM230AA0A1W2PPH8 454 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 GALR2O43603 387 aaPredicted RBP10.83□□□□□ -0.68
RNF4-201ENST00000314289 CDC14BO60729 498 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 DHRS3O75911 302 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 PDSS1Q5T2R2 415 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 CRIP3Q6Q6R5 217 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 AQP3Q92482 292 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 ZNF75AQ96N20 296 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 B4GALT7Q9UBV7 327 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 TMEM14DPA8MWL7 114 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 SYNGR3O43761 229 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 WISP2O76076 250 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 PMP2P02689 132 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 ERCC1P07992 297 aaPredicted RBP10.83□□□□□ -0.68
RNF4-201ENST00000314289 FTH1P19P0C7X4 201 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 HRH1P35367 487 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 ZNF133P52736 654 aaPredicted RBP10.83□□□□□ -0.68
RNF4-201ENST00000314289 PPIAP62937 165 aaKnown RBP10.83□□□□□ -0.68
RNF4-201ENST00000314289 RNFT1Q5M7Z0 435 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 FOXL2NBQ6ZUU3 175 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 PGAP1Q75T13 922 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 TMEM185AQ8NFB2 350 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 OR10R2Q8NGX6 335 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 OR6K3Q8NGY3 331 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 OR1F12Q8NHA8 337 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 ARHGAP5-AS1Q96IT6 56 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 TMEM59Q9BXS4 323 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 ZNF581Q9P0T4 197 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 SPRY1O43609 319 aaPredicted RBP10.83□□□□□ -0.68
RNF4-201ENST00000314289 CYTIPO60759 359 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 RAD51DO75771 328 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 HLA-HP01893 362 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 CCL1P22362 96 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 TMEM50BP56557 158 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 HIST1H3AP68431 136 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 CXADRP78310 365 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 HIST2H3PS2Q5TEC6 136 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 HIST2H3AQ71DI3 136 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 REEP6Q96HR9 211 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 ZNF471Q9BX82 626 aaPredicted RBP10.83□□□□□ -0.68
RNF4-201ENST00000314289 WDR13Q9H1Z4 485 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 C12orf49Q9H741 205 aa10.83□□□□□ -0.68
RNF4-201ENST00000314289 A0A1B0GW55 424 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 CCSO14618 274 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 SSX5O60225 188 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 SNAPC5O75971 98 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 SP1P08047 785 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 DUX4L2P0CJ85 424 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 DUX4L3P0CJ86 424 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 DUX4L4P0CJ87 422 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 DUX4L5P0CJ88 424 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 DUX4L6P0CJ89 424 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 DUX4L7P0CJ90 424 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 RPA2P15927 270 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 OTX1P32242 354 aaPredicted RBP10.82□□□□□ -0.68
RNF4-201ENST00000314289 MECP2P51608 486 aaKnown RBP10.82□□□□□ -0.68
RNF4-201ENST00000314289 ARG2P78540 354 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 JMJD6Q6NYC1 403 aaPredicted RBP10.82□□□□□ -0.68
RNF4-201ENST00000314289 OR51T1Q8NGJ9 327 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 INTS12Q96CB8 462 aaKnown RBP10.82□□□□□ -0.68
RNF4-201ENST00000314289 ADAT1Q9BUB4 502 aaKnown RBP10.82□□□□□ -0.68
RNF4-201ENST00000314289 WNT5BQ9H1J7 359 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 DUX4Q9UBX2 424 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 MLXQ9UH92 298 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 PIEZO2Q9H5I5 2752 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 TRAV14DV4A0A0A6YYC5 116 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 GPR31O00270 319 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 DNPH1O43598 174 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 RAB6AP20340 208 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 CRYGSP22914 178 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 CTSSP25774 331 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 PTGFRP43088 359 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 CCL11P51671 97 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 ARF1P84077 181 aaKnown RBP10.82□□□□□ -0.68
RNF4-201ENST00000314289 PABPC1L2AQ5JQF8 200 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 LIN54Q6MZP7 749 aa10.82□□□□□ -0.68
RNF4-201ENST00000314289 EIF4E3Q8N5X7 224 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms