RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 SURF2Q15527 256 aaPredicted RBP5.33□□□□□ -1.56
SEC22A-201ENST00000309934 DEFB109BQ30KR1 87 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 C10orf128Q5T292 105 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 THSD4Q6ZMP0 1018 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 C1orf122Q6ZSJ8 110 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 CCDC190Q86UF4 302 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 OR8U1Q8NH10 309 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 NKD1Q969G9 470 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 PTX4Q96A99 478 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 PACRGQ96M98 296 aaPredicted RBP5.33□□□□□ -1.56
SEC22A-201ENST00000309934 NOL4LQ96MY1 436 aaPredicted RBP5.33□□□□□ -1.56
SEC22A-201ENST00000309934 SLC6A7Q99884 636 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 SOX7Q9BT81 388 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 SMOC1Q9H4F8 434 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 CLEC2DQ9UHP7 191 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 SLC22A13Q9Y226 551 aa5.33□□□□□ -1.56
SEC22A-201ENST00000309934 OR6C68A6NDL8 312 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 WDR1O75083 606 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 RAD51DO75771 328 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 EPPINO95925 133 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 CCL3P10147 92 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 OR3A1P47881 315 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 SOX2P48431 317 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 CX3CR1P49238 355 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 MMP16P51512 607 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 SRYQ05066 204 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 FOXC1Q12948 553 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 ARFRP1Q13795 201 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 GXYLT1Q4G148 440 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 HIKESHIQ53FT3 197 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 TMEM41BQ5BJD5 291 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 MESTQ5EB52 335 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 ARSJQ5FYB0 599 aaPredicted RBP5.32□□□□□ -1.56
SEC22A-201ENST00000309934 MKXQ8IYA7 352 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 GCNT2Q8N0V5 402 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 OR51L1Q8NGJ5 315 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 OR10D3Q8NH80 312 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 APOBEC3DQ96AK3 386 aaPredicted RBP5.32□□□□□ -1.56
SEC22A-201ENST00000309934 DMRTA2Q96SC8 542 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 ABHD6Q9BV23 337 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 PBDC1Q9BVG4 233 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 C11orf54Q9H0W9 315 aaPredicted RBP5.32□□□□□ -1.56
SEC22A-201ENST00000309934 FLVCR2Q9UPI3 526 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 LSM2Q9Y333 95 aaKnown RBP5.32□□□□□ -1.56
SEC22A-201ENST00000309934 E9PQ18 207 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 TNFSF11O14788 317 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 DOK2O60496 412 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 NPIPB7O75200 414 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 GPX5O75715 221 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 KLF7O75840 302 aaPredicted RBP5.32□□□□□ -1.56
SEC22A-201ENST00000309934 NXPH2O95156 264 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 PRH1P02810 166 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 METTL15P1P0C7V9 234 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 NFYAP23511 347 aaPredicted RBP5.32□□□□□ -1.56
SEC22A-201ENST00000309934 CDKN2AP42771 156 aaKnown RBP5.32□□□□□ -1.56
SEC22A-201ENST00000309934 TAS2R46P59540 309 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 CD81P60033 236 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 IFITM3Q01628 133 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 COL5A1-AS1Q5SY13 56 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 VWA1Q6PCB0 445 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 CNIH2Q6PI25 160 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 CD200R1LQ6Q8B3 271 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 ZNF627Q7L945 461 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 MOB1BQ7L9L4 216 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 OR10A7Q8NGE5 316 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 RNF133Q8WVZ7 376 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 C11orf40Q8WZ69 217 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 UBE2FQ969M7 185 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 TMEM106AQ96A25 262 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 C14orf144Q96I85 54 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 C4orf45Q96LM5 186 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 FOXB1Q99853 325 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 PRRT1Q99946 306 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 CACNG6Q9BXT2 260 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 PKIBQ9C010 78 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 ATG5Q9H1Y0 275 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 METTL17Q9H7H0 456 aaPredicted RBP5.32□□□□□ -1.56
SEC22A-201ENST00000309934 SLC5A6Q9Y289 635 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 IGKV1D-42A0A075B6H8 117 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 LRP5LA4QPB2 252 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 GPR31O00270 319 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 TIAF1O95411 115 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 SLC2A10O95528 541 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 ARG1P05089 322 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 FSTP19883 344 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 MC5RP33032 325 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 CD96P40200 585 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 TMPRSS3P57727 454 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 TAS2R19P59542 299 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 RTP5Q14D33 572 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 AWAT2Q6E213 333 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 MEX3DQ86XN8 651 aaKnown RBP5.32□□□□□ -1.56
SEC22A-201ENST00000309934 MCHR2Q969V1 340 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 SIGLEC11Q96RL6 698 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 TP53RKQ96S44 253 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 KCNK17Q96T54 332 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 C2orf88Q9BSF0 95 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 NXF2Q9GZY0 626 aaKnown RBP5.32□□□□□ -1.56
SEC22A-201ENST00000309934 FOXJ2Q9P0K8 574 aa5.32□□□□□ -1.56
SEC22A-201ENST00000309934 ELOA3CA0A087WX78 387 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms