RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 TMEM59Q9BXS4 323 aa19.29■□□□□ 0.68
IRF3-201ENST00000309877 BANF2Q9H503 90 aa19.29■□□□□ 0.68
IRF3-201ENST00000309877 NDRG3Q9UGV2 375 aa19.29■□□□□ 0.68
IRF3-201ENST00000309877 NOP16Q9Y3C1 178 aaKnown RBP19.29■□□□□ 0.68
IRF3-201ENST00000309877 A0A0A6YYH2 397 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 A0A1W2PQ09 198 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 A6NJ64 397 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 CTDSPLO15194 276 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 ANGPTL7O43827 346 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 HLA-DQB1P01920 261 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 SERPINA2P20848 420 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 INPP1P49441 399 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 DEFA1P59665 94 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 DEFA3P59666 94 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 RSU1Q15404 277 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 FAM189A2Q15884 450 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 ACBD4Q8NC06 268 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 OR8G5Q8NG78 346 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 OR10K1Q8NGX5 313 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 MICU1Q9BPX6 476 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 THAP7Q9BT49 309 aaPredicted RBP19.28■□□□□ 0.68
IRF3-201ENST00000309877 URM1Q9BTM9 101 aaKnown RBP19.28■□□□□ 0.68
IRF3-201ENST00000309877 FGF23Q9GZV9 251 aaPredicted RBP19.28■□□□□ 0.68
IRF3-201ENST00000309877 TMEM100Q9NV29 134 aa19.28■□□□□ 0.68
IRF3-201ENST00000309877 COL6A6A6NMZ7 2263 aa19.27■□□□□ 0.68
IRF3-201ENST00000309877 OR5B21A6NL26 309 aa19.27■□□□□ 0.68
IRF3-201ENST00000309877 SCGNO76038 276 aa19.27■□□□□ 0.68
IRF3-201ENST00000309877 GNG3P63215 75 aa19.27■□□□□ 0.68
IRF3-201ENST00000309877 NKX6-1P78426 367 aaPredicted RBP19.27■□□□□ 0.68
IRF3-201ENST00000309877 GPR176Q14439 515 aa19.27■□□□□ 0.68
IRF3-201ENST00000309877 RAB12Q6IQ22 244 aa19.27■□□□□ 0.68
IRF3-201ENST00000309877 VHLLQ6RSH7 139 aa19.27■□□□□ 0.68
IRF3-201ENST00000309877 POC5Q8NA72 575 aa19.27■□□□□ 0.68
IRF3-201ENST00000309877 RTL8AQ9BWD3 113 aa19.27■□□□□ 0.68
IRF3-201ENST00000309877 A0A1W2PP11 408 aa19.27■□□□□ 0.67
IRF3-201ENST00000309877 DPRXA6NFQ7 191 aa19.27■□□□□ 0.67
IRF3-201ENST00000309877 CSTBP04080 98 aaKnown RBP19.27■□□□□ 0.67
IRF3-201ENST00000309877 HAAOP46952 286 aa19.27■□□□□ 0.67
IRF3-201ENST00000309877 RNASE12Q5GAN4 147 aaKnown RBP19.27■□□□□ 0.67
IRF3-201ENST00000309877 ASCL4Q6XD76 172 aa19.27■□□□□ 0.67
IRF3-201ENST00000309877 CDH24Q86UP0 819 aa19.27■□□□□ 0.67
IRF3-201ENST00000309877 CALHM1Q8IU99 346 aa19.27■□□□□ 0.67
IRF3-201ENST00000309877 PXT1Q8NFP0 134 aa19.27■□□□□ 0.67
IRF3-201ENST00000309877 OR51F2Q8NH61 342 aa19.27■□□□□ 0.67
IRF3-201ENST00000309877 ADAT1Q9BUB4 502 aaKnown RBP19.27■□□□□ 0.67
IRF3-201ENST00000309877 DUSP13Q9UII6 198 aa19.27■□□□□ 0.67
IRF3-201ENST00000309877 ABCD4O14678 606 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 ZNF780AO75290 641 aaPredicted RBP19.26■□□□□ 0.67
IRF3-201ENST00000309877 HTR3BO95264 441 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 MGMTP16455 207 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 VEGFCP49767 419 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 MRPS10P82664 201 aaKnown RBP19.26■□□□□ 0.67
IRF3-201ENST00000309877 DGCR2P98153 550 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 BSPH1Q075Z2 132 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 CDSNQ15517 529 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 OR8G1Q15617 311 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 TMEM255AQ5JRV8 349 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 ZNF573Q86YE8 665 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 ZNF611Q8N823 705 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 ZSCAN4Q8NAM6 433 aaPredicted RBP19.26■□□□□ 0.67
IRF3-201ENST00000309877 SLC22A4Q9H015 551 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 LPAR5Q9H1C0 372 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 PCDHB16Q9NRJ7 776 aa19.26■□□□□ 0.67
IRF3-201ENST00000309877 PRR14LQ5THK1 2151 aa19.25■□□□□ 0.67
IRF3-201ENST00000309877 LINC00854A0A1B0GVQ3 168 aa19.25■□□□□ 0.67
IRF3-201ENST00000309877 GSTZ1O43708 216 aaPredicted RBP19.25■□□□□ 0.67
IRF3-201ENST00000309877 CYB5AP00167 134 aa19.25■□□□□ 0.67
IRF3-201ENST00000309877 CHRM2P08172 466 aa19.25■□□□□ 0.67
IRF3-201ENST00000309877 RPS27AP62979 156 aaKnown RBP19.25■□□□□ 0.67
IRF3-201ENST00000309877 SLC22A25Q6T423 547 aa19.25■□□□□ 0.67
IRF3-201ENST00000309877 SLC25A26Q70HW3 274 aa19.25■□□□□ 0.67
IRF3-201ENST00000309877 CHST4Q8NCG5 386 aa19.25■□□□□ 0.67
IRF3-201ENST00000309877 OR51T1Q8NGJ9 327 aa19.25■□□□□ 0.67
IRF3-201ENST00000309877 SMIM4Q8WVI0 70 aa19.25■□□□□ 0.67
IRF3-201ENST00000309877 PCNX1Q96RV3 2341 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP19.24■□□□□ 0.67
IRF3-201ENST00000309877 GABARAPH6UMI1 98 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 ZNF250P15622 560 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 SORDQ00796 357 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 SNTB1Q13884 538 aaKnown RBP19.24■□□□□ 0.67
IRF3-201ENST00000309877 MOGAT2Q3SYC2 334 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 ZNF57Q68EA5 555 aaPredicted RBP19.24■□□□□ 0.67
IRF3-201ENST00000309877 NUP37Q8NFH4 326 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 TMEM171Q8WVE6 324 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 FCAMRQ8WWV6 532 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 SELENOIQ9C0D9 397 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 ESRP2Q9H6T0 727 aaKnown RBP19.24■□□□□ 0.67
IRF3-201ENST00000309877 NKIRAS2Q9NYR9 191 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 USP24Q9UPU5 2620 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 RAB27BO00194 218 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 CD3GP09693 182 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 PTHLHP12272 177 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 GTF2F2P13984 249 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 GRNP28799 593 aaKnown RBP19.24■□□□□ 0.67
IRF3-201ENST00000309877 KLF3P57682 345 aaPredicted RBP19.24■□□□□ 0.67
IRF3-201ENST00000309877 SELENOVP59797 346 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 MKXQ8IYA7 352 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 OR56B1Q8NGI3 324 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 OR10R2Q8NGX6 335 aa19.24■□□□□ 0.67
IRF3-201ENST00000309877 LINC01560Q8TB33 94 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms