RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 ZNF20P17024 532 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 CD80P33681 288 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 HAAOP46952 286 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 TAS2R43P59537 309 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 BDH1Q02338 343 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 HAGHLQ6PII5 290 aaPredicted RBP7.63□□□□□ -1.19
PDE4D-201ENST00000309641 PARP16Q8N5Y8 322 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 DEFB108BQ8NET1 73 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 CLDND2Q8NHS1 167 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 PP6455Q8WZ26 134 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 RFT1Q96AA3 541 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 TMED9Q9BVK6 235 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 YTHDF1Q9BYJ9 559 aaKnown RBP7.63□□□□□ -1.19
PDE4D-201ENST00000309641 TLNRD1Q9H1K6 362 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 PPIL3Q9H2H8 161 aaKnown RBP7.63□□□□□ -1.19
PDE4D-201ENST00000309641 FN3KRPQ9HA64 309 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 TAS2R4Q9NYW5 299 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 LRCH1Q9Y2L9 728 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 NPTNQ9Y639 398 aa7.63□□□□□ -1.19
PDE4D-201ENST00000309641 SONP18583 2426 aaKnown RBP7.63□□□□□ -1.19
PDE4D-201ENST00000309641 IGHV3OR15-7A0A075B7D8 119 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 ISPDA4D126 451 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 PLATP00750 562 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 LHBP01229 141 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 CD99P14209 185 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 USF1P22415 310 aaPredicted RBP7.62□□□□□ -1.19
PDE4D-201ENST00000309641 CHN2P52757 468 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 GP2P55259 537 aaKnown RBP7.62□□□□□ -1.19
PDE4D-201ENST00000309641 LMO4P61968 165 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 BTG1P62324 171 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 RPS25P62851 125 aaKnown RBP7.62□□□□□ -1.19
PDE4D-201ENST00000309641 KRTAP1-1Q07627 177 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 SSX1Q16384 188 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 ZNF181Q2M3W8 571 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 KCTD21Q4G0X4 260 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 YIF1BQ5BJH7 314 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 ZNF773Q6PK81 442 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 UTS2BQ765I0 119 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 LRRC29Q8WV35 223 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 AQP3Q92482 292 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 ITFG2Q969R8 447 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 C10orf35Q96D05 121 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 C18orf12Q96KH6 178 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 TMEM165Q9HC07 324 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 RNF7Q9UBF6 113 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 OR5B21A6NL26 309 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 TMEM210A6NLX4 147 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 F8VVB4 439 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 F8VWA3 439 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 ATF1P18846 271 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 AZGP1P25311 298 aaKnown RBP7.62□□□□□ -1.19
PDE4D-201ENST00000309641 LOXL1Q08397 574 aaPredicted RBP7.62□□□□□ -1.19
PDE4D-201ENST00000309641 MLLT11Q13015 90 aaPredicted RBP7.62□□□□□ -1.19
PDE4D-201ENST00000309641 TPBGQ13641 420 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 Q499Y3 187 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 ARMCX4Q5H9R4 360 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 ZNF529Q6P280 563 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 LYPD2Q6UXB3 125 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 SERPINA12Q8IW75 414 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 PHC2Q8IXK0 858 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 CCDC54Q8NEL0 328 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 OR5T2Q8NGG2 359 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 RAB1CQ92928 201 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 ERGIC1Q969X5 290 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 GSX1Q9H4S2 264 aaPredicted RBP7.62□□□□□ -1.19
PDE4D-201ENST00000309641 ZCCHC4Q9H5U6 513 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 SF3B6Q9Y3B4 125 aaKnown RBP7.62□□□□□ -1.19
PDE4D-201ENST00000309641 MALRD1Q5VYJ5 2156 aa7.62□□□□□ -1.19
PDE4D-201ENST00000309641 NIPBLQ6KC79 2804 aaeCLIP7.62□□□□□ -1.19
PDE4D-201ENST00000309641 PPIAL4EA0A075B759 164 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 TRBV5-7A0A0A0MS05 114 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 A0A1B0GW55 424 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 ZNF879B4DU55 563 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 PPIAL4DF5H284 164 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 GATBO75879 557 aaKnown RBP7.61□□□□□ -1.19
PDE4D-201ENST00000309641 SERPINA3P01011 423 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 INHBBP09529 407 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 DUX4L2P0CJ85 424 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 DUX4L3P0CJ86 424 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 DUX4L4P0CJ87 422 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 DUX4L5P0CJ88 424 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 DUX4L6P0CJ89 424 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 DUX4L7P0CJ90 424 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 PPIAL4FP0DN26 164 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 CPEP16870 476 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 FUT6P51993 359 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 SEC61A1P61619 476 aaKnown RBP7.61□□□□□ -1.19
PDE4D-201ENST00000309641 MZT1Q08AG7 82 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 TMEM249Q2WGJ8 235 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 ACSM3Q53FZ2 586 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 UBE2UQ5VVX9 321 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 DUX4L9Q6RFH8 374 aaPredicted RBP7.61□□□□□ -1.19
PDE4D-201ENST00000309641 TMEM91Q6ZNR0 172 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 Q71RC1 249 aaPredicted RBP7.61□□□□□ -1.19
PDE4D-201ENST00000309641 ZNF367Q7RTV3 350 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 LRRC28Q86X40 367 aaPredicted RBP7.61□□□□□ -1.19
PDE4D-201ENST00000309641 FAM90A1Q86YD7 464 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 OR5D18Q8NGL1 313 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 OR5D14Q8NGL3 314 aa7.61□□□□□ -1.19
PDE4D-201ENST00000309641 OR11L1Q8NGX0 322 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms