RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 CHRM2P08172 466 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 IGHV1-2P23083 117 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 PLP2Q04941 152 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 C2orf68Q2NKX9 166 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 ACSF3Q4G176 576 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 TMED4Q7Z7H5 227 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 UXS1Q8NBZ7 420 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 RAB3CQ96E17 227 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 POM121L2Q96KW2 1035 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 GPR137Q96N19 417 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 SLC25A21Q9BQT8 299 aaPredicted RBP19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 RGCCQ9H4X1 137 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 IFT46Q9NQC8 304 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 GLRX2Q9NS18 164 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 ATPIF1Q9UII2 106 aa19.43■□□□□ 0.7
PDLIM2-202ENST00000308354 PIEZO2Q9H5I5 2752 aa19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 IGKV1-27A0A075B6S5 117 aa19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 XRCC2O43543 280 aa19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 ALX3O95076 343 aa19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 NRASP01111 189 aa19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 UBBP0CG47 229 aa19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 SERPINA2P20848 420 aa19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 KIR2DL2P43627 348 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 GK2Q14410 553 aaPredicted RBP19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 RNASE10Q5GAN6 216 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 MDP1Q86V88 176 aa19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 OR13C8Q8NGS7 320 aa19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 PIGCQ92535 297 aa19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 EIF3KQ9UBQ5 218 aaKnown RBP19.42■□□□□ 0.7
PDLIM2-202ENST00000308354 MEF2DQ14814 521 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 OR8B8Q15620 311 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 DKK4Q9UBT3 224 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 ZNF391Q9UJN7 358 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 STARD10Q9Y365 291 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 OR14I1A6ND48 311 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 SPRY1O43609 319 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 ANGPTL7O43827 346 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 GIPP09681 153 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 NAT2P11245 290 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 HRH1P35367 487 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 TMEM50BP56557 158 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 GUSBP1Q15486 140 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 LGALSLQ3ZCW2 172 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 CLVS2Q5SYC1 327 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 ATPAF1Q5TC12 328 aaPredicted RBP19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 SPSB4Q96A44 273 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 ABHD17AQ96GS6 310 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 WASF3Q9UPY6 502 aa19.41■□□□□ 0.7
PDLIM2-202ENST00000308354 SIX6O95475 246 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 TMEM225BP0DP42 221 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 COX5BP10606 129 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 HIST1H1DP16402 221 aaKnown RBP19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 GNG2P59768 71 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 SNAPC3Q92966 411 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 ARHGAP5-AS1Q96IT6 56 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 S100A13Q99584 98 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 CST11Q9H112 138 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 GTF3C1Q12789 2109 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 DISC1C4P0D8 188 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 OR2A4O95047 310 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 OR4E1P0C645 316 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 SSTR2P30874 369 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 H2BFSP57053 126 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 CXADRP78310 365 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 C17orf107Q6ZR85 190 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 MOB3CQ70IA8 216 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 MYPOPQ86VE0 399 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 OR2AK2Q8NG84 335 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 WNT2BQ93097 391 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 OR2A7Q96R45 310 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 ALX4Q9H161 411 aaPredicted RBP19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 CRIM1Q9NZV1 1036 aa19.4■□□□□ 0.7
PDLIM2-202ENST00000308354 MKRN2OSH3BPM6 223 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 MGMTP16455 207 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 ZNF81P51508 661 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 TMEM42Q69YG0 159 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 FTMTQ8N4E7 242 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 OR56B2PQ8NGI1 322 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 OR56B1Q8NGI3 324 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 SPSB1Q96BD6 273 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 URM1Q9BTM9 101 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 CELA3BP08861 270 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 GSTP1P09211 210 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 APLNRP35414 380 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 WNT5AP41221 380 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 HTR2BP41595 481 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 ALDH3B1P43353 468 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 RAP2BP61225 183 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 TSPAN5P62079 268 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 RPS27AP62979 156 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 CNN3Q15417 329 aaKnown RBP19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 PLCXD3Q63HM9 321 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 OR51T1Q8NGJ9 327 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 CCDC107Q8WV48 283 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 APOBEC3DQ96AK3 386 aaPredicted RBP19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 MRGPRFQ96AM1 343 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 BORCS8Q96FH0 119 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 PRRT1Q99946 306 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 SLC2A8Q9NY64 477 aa19.39■□□□□ 0.69
PDLIM2-202ENST00000308354 ZNF850A8MQ14 1090 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms