RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 BLOC1S1P78537 153 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 SPNS3Q6ZMD2 512 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 ZNF627Q7L945 461 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TMED4Q7Z7H5 227 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TMEM123Q8N131 208 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 NOXO1Q8NFA2 376 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 OR2M3Q8NG83 312 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TSLPQ969D9 159 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TMEM41AQ96HV5 264 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 C5orf34Q96MH7 638 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 CDH20Q9HBT6 801 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TMEM138Q9NPI0 162 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 RPH3AQ9Y2J0 694 aaPredicted RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 MYO7AQ13402 2215 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TRAV20A0A0B4J274 112 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 SS18L1O75177 396 aaPredicted RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 FBLP22087 321 aaKnown RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 LAP3P28838 519 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 PPT1P50897 306 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 RND2P52198 227 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 PAX9P55771 341 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 TRIP6Q15654 476 aaKnown RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 NNATQ16517 81 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 EIF2S3LQ2VIR3 472 aaKnown RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 HIKESHIQ53FT3 197 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 HIST3H2BBQ8N257 126 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 GTPBP8Q8N3Z3 284 aaPredicted RBP4.74□□□□□ -1.65
VPS50-202ENST00000305866 SLC25A45Q8N413 288 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 ZNF676Q8N7Q3 588 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 DDIT4LQ96D03 193 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 AKR1E2Q96JD6 320 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 ARL5BQ96KC2 179 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 SIGLEC12Q96PQ1 595 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 PYGO2Q9BRQ0 406 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 ZNF700Q9H0M5 742 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 PROK2Q9HC23 129 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 FBXL17Q9UF56 701 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 RNF115Q9Y4L5 304 aa4.74□□□□□ -1.65
VPS50-202ENST00000305866 hCG_1809904A0A1W2PP81 198 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 A0A1W2PR64 198 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 A0A1W2PRV1 198 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 MKRN2OSH3BPM6 223 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 K7EPK0 472 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 P2RY10O00398 339 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 IGLV2-14P01704 120 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 SPARCP09486 303 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 SEC11BP0C7V7 166 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 CEACAM1P13688 526 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 FOLR1P15328 257 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 ITGA3P26006 1051 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 PLA2G5P39877 138 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 NPY4RP50391 375 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 FABP9Q0Z7S8 132 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 EIF2B1Q14232 305 aaKnown RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 PEA15Q15121 130 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 RAB35Q15286 201 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 UBE2V2Q15819 145 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 DEFB110Q30KQ9 67 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 LRRC37A5PQ49AS3 106 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 OR2B11Q5JQS5 317 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 PHYHD1Q5SRE7 291 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 SSX7Q7RTT5 188 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 FAM71E2Q8N5Q1 922 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 OR8G5Q8NG78 346 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 Q8WTZ3 238 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 ABHD14AQ9BUJ0 271 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 ANGPTL4Q9BY76 406 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 FGF23Q9GZV9 251 aaPredicted RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 PBOV1Q9GZY1 135 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 TREM2Q9NZC2 230 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 WIF1Q9Y5W5 379 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 EIF1AYO14602 144 aaKnown RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 TAAR5O14804 337 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 SMAD9O15198 467 aaKnown RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H2BKO60814 126 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 CYB5AP00167 134 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H2BJP06899 126 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 CTSEP14091 401 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 CRYGSP22914 178 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H2BOP23527 126 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H2BBP33778 126 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 EIF1AXP47813 144 aaKnown RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 PDLIM4P50479 330 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H2BDP58876 126 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H2BCP62807 126 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 GRB2P62993 217 aaKnown RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 CCL7P80098 99 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 PLCXD2Q0VAA5 305 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 CHAF1BQ13112 559 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 ICAM4Q14773 271 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST2H2BEQ16778 126 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.73□□□□□ -1.65
VPS50-202ENST00000305866 DCXRQ7Z4W1 244 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 SULF2Q8IWU5 870 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 OR8B12Q8NGG6 310 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 DCUN1D4Q92564 292 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 HIST1H2BHQ93079 126 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 ISOC2Q96AB3 205 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 ARHGAP5-AS1Q96IT6 56 aa4.73□□□□□ -1.65
VPS50-202ENST00000305866 OXGR1Q96P68 337 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms