RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 FAM89BQ8N5H3 189 aa21.34■■□□□ 1.01
SPTSSA-201ENST00000298130 PIGQQ9BRB3 760 aa21.34■■□□□ 1.01
SPTSSA-201ENST00000298130 ADAMTS20P59510 1910 aa21.34■■□□□ 1.01
SPTSSA-201ENST00000298130 HFEQ30201 348 aa21.34■■□□□ 1.01
SPTSSA-201ENST00000298130 TAF9BQ9HBM6 251 aa21.34■■□□□ 1.01
SPTSSA-201ENST00000298130 PISDQ9UG56 409 aa21.34■■□□□ 1.01
SPTSSA-201ENST00000298130 MED19A0JLT2 244 aaPredicted RBP21.33■■□□□ 1.01
SPTSSA-201ENST00000298130 C9JQL5 133 aa21.33■■□□□ 1.01
SPTSSA-201ENST00000298130 DHRS3O75911 302 aa21.33■■□□□ 1.01
SPTSSA-201ENST00000298130 ACKR3P25106 362 aa21.33■■□□□ 1.01
SPTSSA-201ENST00000298130 ZNF385CQ66K41 422 aaPredicted RBP21.33■■□□□ 1.01
SPTSSA-201ENST00000298130 MRPL24Q96A35 216 aaKnown RBP21.33■■□□□ 1.01
SPTSSA-201ENST00000298130 BSCL2Q96G97 398 aaPredicted RBP21.33■■□□□ 1.01
SPTSSA-201ENST00000298130 PPP1R3BQ86XI6 285 aa21.33■■□□□ 1
SPTSSA-201ENST00000298130 FBXO17Q96EF6 278 aa21.33■■□□□ 1
SPTSSA-201ENST00000298130 SHDQ96IW2 340 aa21.33■■□□□ 1
SPTSSA-201ENST00000298130 C14orf166Q9Y224 244 aaKnown RBP21.33■■□□□ 1
SPTSSA-201ENST00000298130 CCDC85CA6NKD9 419 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 CEACAM18A8MTB9 384 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 FOXI3A8MTJ6 420 aaPredicted RBP21.32■■□□□ 1
SPTSSA-201ENST00000298130 M0R135 149 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 TLX3O43711 291 aaPredicted RBP21.32■■□□□ 1
SPTSSA-201ENST00000298130 HKR1P10072 659 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 ZNF708P17019 499 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 FXYD4P59646 89 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 ZNF799Q96GE5 643 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 MMP26Q9NRE1 261 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 NPIPA2E9PIF3 369 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 NPIPA3F8WFD2 350 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 TNFSF11O14788 317 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 PRF1P14222 555 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 RBMXP38159 391 aaKnown RBP21.32■■□□□ 1
SPTSSA-201ENST00000298130 MTCP1P56278 107 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 SLC35A1P78382 337 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 PJVKQ0ZLH3 352 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 GJC3Q8NFK1 279 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 AQP10Q96PS8 301 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 NELFAQ9H3P2 528 aa21.32■■□□□ 1
SPTSSA-201ENST00000298130 IGLV3-32A0A0A0MS00 114 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 NAT2P11245 290 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 TAS2R46P59540 309 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 NAAAQ02083 359 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 DNASE2BQ8WZ79 361 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 NABP1Q96AH0 204 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 PRELID3BQ9Y3B1 194 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 B3GALT1Q9Y5Z6 326 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 CD63P08962 238 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 CD80P33681 288 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 LINC00518Q8N0U6 118 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 ADAMTS17Q8TE56 1095 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 HDGFL3Q9Y3E1 203 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 IFNA2P01563 188 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 SULF2Q8IWU5 870 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 FADS6Q8N9I5 356 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 SGK3Q96BR1 496 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 SCGB3A2Q96PL1 93 aa21.31■■□□□ 1
SPTSSA-201ENST00000298130 NXT1Q9UKK6 140 aaKnown RBP21.31■■□□□ 1
SPTSSA-201ENST00000298130 SHANK1Q9Y566 2161 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 LY6G6EA0A0G2JKS1 128 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 DKK1O94907 266 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 HGFACQ04756 655 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 IL15RAQ13261 267 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 ADPRHL1Q8NDY3 354 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 EMG1Q92979 244 aaKnown RBP21.3■■□□□ 1
SPTSSA-201ENST00000298130 REEP6Q96HR9 211 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 CMSS1Q9BQ75 279 aaKnown RBP21.3■■□□□ 1
SPTSSA-201ENST00000298130 U3KQA8 63 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 NDUFA2O43678 99 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 MTRF1O75570 445 aaKnown RBP21.3■■□□□ 1
SPTSSA-201ENST00000298130 NOVA1P51513 510 aaKnown RBP21.3■■□□□ 1
SPTSSA-201ENST00000298130 KCNMB1Q16558 191 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 OR10Z1Q8NGY1 313 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 NRIP2Q9BQI9 281 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 CHST5Q9GZS9 411 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 FBXL17Q9UF56 701 aa21.3■■□□□ 1
SPTSSA-201ENST00000298130 TRIOBPQ9H2D6 2365 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 DHHO43323 396 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 XRCC2O43543 280 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 DIRAS3O95661 229 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 CPT2P23786 658 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 RPL12P30050 165 aaKnown RBP21.29■■□□□ 1
SPTSSA-201ENST00000298130 CBX5P45973 191 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 FLI1Q01543 452 aaPredicted RBP21.29■■□□□ 1
SPTSSA-201ENST00000298130 PHLDA2Q53GA4 152 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 HAS2Q92819 552 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 ERGIC1Q969X5 290 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 ULBP2Q9BZM5 246 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 IGKV1-27A0A075B6S5 117 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 A0A1B0GV50 99 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 FIGNL2A6NMB9 653 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 FCGR2CP31995 323 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 NTF4P34130 210 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 ZNF468Q5VIY5 522 aaPredicted RBP21.29■■□□□ 1
SPTSSA-201ENST00000298130 GGNBP1Q5YKI7 109 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 C5orf24Q7Z6I8 188 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 SPAG16Q8N0X2 631 aa21.29■■□□□ 1
SPTSSA-201ENST00000298130 ZNF850A8MQ14 1090 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 K7EPK0 472 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 SFTA3P0C7M3 94 aa21.28■■□□□ 1
SPTSSA-201ENST00000298130 ZNF774Q6NX45 483 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms