RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 TEX29Q8N6K0 151 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 OR10G6Q8NH81 332 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 SPXQ9BT56 116 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 MS4A8Q9BY19 250 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 FBXO34Q9NWN3 711 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 ST3GAL6Q9Y274 331 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 PPIAL4AQ9Y536 164 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 GRIFINA4D1Z8 144 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 PPIHO43447 177 aaKnown RBP10.53□□□□□ -0.72
SNIP1-201ENST00000296215 SPINK4O60575 86 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 AZU1P20160 251 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 AOAHP28039 575 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 PPP1CCP36873 323 aaKnown RBP10.53□□□□□ -0.72
SNIP1-201ENST00000296215 RAET1LQ5VY80 246 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 SYS1Q8N2H4 156 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 C17orf47Q8NEP4 570 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 OR51A2Q8NGJ7 313 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 DGAT2Q96PD7 388 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 SIGLEC11Q96RL6 698 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 SOSTQ9BQB4 213 aa10.53□□□□□ -0.72
SNIP1-201ENST00000296215 FAM221AA4D161 298 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 ZNF749O43361 778 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 CTSVO60911 334 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 ACRP10323 421 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 ECI1P42126 302 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 CLDN10P78369 228 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 ROM1Q03395 351 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 RNF175Q8N4F7 328 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 C2orf15Q8WU43 125 aaKnown RBP10.52□□□□□ -0.72
SNIP1-201ENST00000296215 NUS1Q96E22 293 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 OBP2BQ9NPH6 170 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 PLEKHJ1Q9NW61 149 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 OBP2AQ9NY56 170 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 CGGBP1Q9UFW8 167 aaPredicted RBP10.52□□□□□ -0.72
SNIP1-201ENST00000296215 HDGFL3Q9Y3E1 203 aa10.52□□□□□ -0.72
SNIP1-201ENST00000296215 ARID1BQ8NFD5 2236 aaPredicted RBP10.52□□□□□ -0.73
SNIP1-201ENST00000296215 KCNE1BA0A087WTH5 132 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 GLOD5A6NK44 160 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 F5H5K5 113 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 EIF4E2O60573 245 aaKnown RBP10.52□□□□□ -0.73
SNIP1-201ENST00000296215 CST7O76096 145 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 CHRM2P08172 466 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 CEACAM3P40198 252 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 HMGA2P52926 109 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 P2RY6Q15077 328 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 SLC8B1Q6J4K2 584 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 CD200R1LQ6Q8B3 271 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 TMEM86AQ8N2M4 240 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 APCDD1LQ8NCL9 501 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 OR10S1Q8NGN2 331 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 POM121L2Q96KW2 1035 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 GUCD1Q96NT3 240 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 OR4C12Q96R67 309 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 ZNF737O75373 536 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 ZNF728P0DKX0 622 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 GGTA1PQ4G0N0 100 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 TRNP1Q6NT89 227 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 FAM219AQ8IW50 185 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 RNASEH2CQ8TDP1 164 aaKnown RBP10.52□□□□□ -0.73
SNIP1-201ENST00000296215 TMED7Q9Y3B3 224 aa10.52□□□□□ -0.73
SNIP1-201ENST00000296215 ODAMA1E959 279 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 WTIPA6NIX2 430 aaPredicted RBP10.51□□□□□ -0.73
SNIP1-201ENST00000296215 C1QCP02747 245 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 FURINP09958 794 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 HKR1P10072 659 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 VIPR2P41587 438 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 HSD11B2P80365 405 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 PLEKHS1Q5SXH7 462 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 C9orf135Q5VTT2 229 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 LRP10Q7Z4F1 713 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 PLA2G12AQ9BZM1 189 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 ULBP3Q9BZM4 244 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 EGLN1Q9GZT9 426 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 SLC17A5Q9NRA2 495 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 TRAV14DV4A0A0A6YYC5 116 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 A0A1B0GU03 582 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 CTSDP07339 412 aaPredicted RBP10.51□□□□□ -0.73
SNIP1-201ENST00000296215 PPICP45877 212 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 CDKN1CP49918 316 aaPredicted RBP10.51□□□□□ -0.73
SNIP1-201ENST00000296215 CLDN18P56856 261 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 PLCXD2Q0VAA5 305 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 LYRM7Q5U5X0 104 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 C9orf57Q5W0N0 161 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 BRICD5Q6PL45 260 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 MYEOVQ96EZ4 313 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 WSB2Q9NYS7 404 aaPredicted RBP10.51□□□□□ -0.73
SNIP1-201ENST00000296215 LSM7Q9UK45 103 aaKnown RBP10.51□□□□□ -0.73
SNIP1-201ENST00000296215 YIPF1Q9Y548 306 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 SDCBPO00560 298 aaPredicted RBP10.51□□□□□ -0.73
SNIP1-201ENST00000296215 POLR2LP62875 67 aaKnown RBP10.51□□□□□ -0.73
SNIP1-201ENST00000296215 ZNF506Q5JVG8 444 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 LYG1Q8N1E2 194 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 TTC9BQ8N6N2 239 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 OR4P4Q8NGL7 312 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 OR2K2Q8NGT1 345 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 ZFYVE21Q9BQ24 234 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 THYN1Q9P016 225 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 MRC1P22897 1456 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 CDC14CA4D256 554 aa10.51□□□□□ -0.73
SNIP1-201ENST00000296215 SNURFLB1AK76 121 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms