RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 ANGPTL6Q8NI99 470 aa20.85■□□□□ 0.93
TRIM54-201ENST00000296098 GPR132Q9UNW8 380 aa20.85■□□□□ 0.93
TRIM54-201ENST00000296098 MYO7BQ6PIF6 2116 aa20.85■□□□□ 0.93
TRIM54-201ENST00000296098 hCG_38984A0A1B0GV85 526 aa20.84■□□□□ 0.93
TRIM54-201ENST00000296098 RSU1Q15404 277 aa20.84■□□□□ 0.93
TRIM54-201ENST00000296098 TMEM128Q5BJH2 165 aa20.84■□□□□ 0.93
TRIM54-201ENST00000296098 TMEM42Q69YG0 159 aa20.84■□□□□ 0.93
TRIM54-201ENST00000296098 TMEM65Q6PI78 240 aa20.84■□□□□ 0.93
TRIM54-201ENST00000296098 PLXDC2Q6UX71 529 aa20.84■□□□□ 0.93
TRIM54-201ENST00000296098 BORCS8Q96FH0 119 aa20.84■□□□□ 0.93
TRIM54-201ENST00000296098 SEC22AQ96IW7 307 aa20.84■□□□□ 0.93
TRIM54-201ENST00000296098 IP6K3Q96PC2 410 aa20.84■□□□□ 0.93
TRIM54-201ENST00000296098 TMEM9BQ9NQ34 198 aa20.84■□□□□ 0.93
TRIM54-201ENST00000296098 IGKV1-27A0A075B6S5 117 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 FAM25EA8MYX2 175 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 RRASP10301 218 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 RBP2P50120 134 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 AP2S1P53680 142 aaPredicted RBP20.83■□□□□ 0.93
TRIM54-201ENST00000296098 PLGLB1Q02325 96 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 PABPC1L2AQ5JQF8 200 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 KCTD9Q7L273 389 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 OR13G1Q8NGZ3 307 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 MAFIPQ8WZ33 124 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 SCGB3A2Q96PL1 93 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 C5orf66Q9H5L9 145 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 EHFQ9NZC4 300 aa20.83■□□□□ 0.93
TRIM54-201ENST00000296098 RTTNQ86VV8 2226 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 SPRY1O43609 319 aaPredicted RBP20.83■□□□□ 0.92
TRIM54-201ENST00000296098 ANGPTL7O43827 346 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 HTR3BO95264 441 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 NRASP01111 189 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 CSTBP04080 98 aaKnown RBP20.83■□□□□ 0.92
TRIM54-201ENST00000296098 SLC25A4P12235 298 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 MPGP29372 298 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 FAM3AP98173 230 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 C11orf87Q6NUJ2 197 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 ALKAL2Q6UX46 152 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 C6orf201Q7Z4U5 140 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 PEG10Q86TG7 708 aaKnown RBP20.83■□□□□ 0.92
TRIM54-201ENST00000296098 LHFPL1Q86WI0 220 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 TMEM251Q8N6I4 163 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 TMEM185AQ8NFB2 350 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 OR6K3Q8NGY3 331 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 SCARB1Q8WTV0 552 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 MARVELD3Q96A59 401 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 SLC7A10Q9NS82 523 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 ZNF701Q9NV72 531 aaPredicted RBP20.83■□□□□ 0.92
TRIM54-201ENST00000296098 PARPBPQ9NWS1 579 aa20.83■□□□□ 0.92
TRIM54-201ENST00000296098 XRCC2O43543 280 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 PLATP00750 562 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 SERPINA5P05154 406 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 ZNF92Q03936 586 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 LRRC37A5PQ49AS3 106 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 NKAPLQ5M9Q1 402 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 PPP1R1CQ8WVI7 109 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 PPA2Q9H2U2 334 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 PLEKHJ1Q9NW61 149 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 ATPIF1Q9UII2 106 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 MCTS1Q9ULC4 181 aaKnown RBP20.82■□□□□ 0.92
TRIM54-201ENST00000296098 A0A0D9SG52 128 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 DBX1A6NMT0 343 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 ZNF806P0C7X5 589 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 OR8B8Q15620 311 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 CHRFAM7AQ494W8 412 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 RFPL4BQ6ZWI9 263 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 SLC51BQ86UW2 128 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 OR5AP2Q8NGF4 316 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 TMEM230Q96A57 120 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 OSGIN2Q9Y236 505 aa20.82■□□□□ 0.92
TRIM54-201ENST00000296098 FIGNL2A6NMB9 653 aa20.81■□□□□ 0.92
TRIM54-201ENST00000296098 SDCBPO00560 298 aaPredicted RBP20.81■□□□□ 0.92
TRIM54-201ENST00000296098 ARF1P84077 181 aaKnown RBP20.81■□□□□ 0.92
TRIM54-201ENST00000296098 ZNF345Q14585 488 aa20.81■□□□□ 0.92
TRIM54-201ENST00000296098 TUSC5Q8IXB3 177 aa20.81■□□□□ 0.92
TRIM54-201ENST00000296098 EMG1Q92979 244 aaKnown RBP20.81■□□□□ 0.92
TRIM54-201ENST00000296098 FER1L6-AS2Q96M78 137 aa20.81■□□□□ 0.92
TRIM54-201ENST00000296098 TNFSF18Q9UNG2 199 aa20.81■□□□□ 0.92
TRIM54-201ENST00000296098 AHCTF1Q8WYP5 2266 aa20.81■□□□□ 0.92
TRIM54-201ENST00000296098 NCOR1O75376 2440 aa20.81■□□□□ 0.92
TRIM54-201ENST00000296098 EDN3P14138 238 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 ATP1B3P54709 279 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 CAMK2BQ13554 666 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 STK11Q15831 433 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 AADACL3Q5VUY0 350 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 CPEB3Q8NE35 698 aaKnown RBP20.8■□□□□ 0.92
TRIM54-201ENST00000296098 C1QTNF5Q9BXJ0 243 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 PRDM14Q9GZV8 571 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 CALHM2Q9HA72 323 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 KLF13Q9Y2Y9 288 aaPredicted RBP20.8■□□□□ 0.92
TRIM54-201ENST00000296098 ZNF587BE7ETH6 402 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 CALCRP30988 508 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 ASCL4Q6XD76 172 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 CCDC28AQ8IWP9 274 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 FNDC9Q8TBE3 224 aa20.8■□□□□ 0.92
TRIM54-201ENST00000296098 ZNF816-ZNF321PA0A0X1KG74 233 aa20.79■□□□□ 0.92
TRIM54-201ENST00000296098 RPL36A-HNRNPH2H7BZ11 118 aa20.79■□□□□ 0.92
TRIM54-201ENST00000296098 I3L521 148 aa20.79■□□□□ 0.92
TRIM54-201ENST00000296098 NME2P1O60361 137 aa20.79■□□□□ 0.92
TRIM54-201ENST00000296098 OR2F2O95006 317 aa20.79■□□□□ 0.92
TRIM54-201ENST00000296098 SFT2D2O95562 160 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms