RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 GSTP1P09211 210 aaKnown RBP14.64□□□□□ -0.07
CPSF4-201ENST00000292476 UBBP0CG47 229 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 VSIG8P0DPA2 414 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 GK2Q14410 553 aaPredicted RBP14.64□□□□□ -0.07
CPSF4-201ENST00000292476 DCAF12L2Q5VW00 463 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 FAM180AQ6UWF9 173 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 GSG1LQ6UXU4 331 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 TRAPPC6BQ86SZ2 158 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 SLC25A42Q86VD7 318 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 OR13C8Q8NGS7 320 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 OR6K3Q8NGY3 331 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 WNT2BQ93097 391 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 SLC6A7Q99884 636 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 FXYD6Q9H0Q3 95 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 PNRC2Q9NPJ4 139 aaKnown RBP14.64□□□□□ -0.07
CPSF4-201ENST00000292476 CLCF1Q9UBD9 225 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 ANAPC10Q9UM13 185 aa14.64□□□□□ -0.07
CPSF4-201ENST00000292476 A0A0D9SG52 128 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 B8ZZF3 427 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 SS18L1O75177 396 aaPredicted RBP14.63□□□□□ -0.07
CPSF4-201ENST00000292476 SIX6O95475 246 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 IL2RAP01589 272 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 PTGER4P35408 488 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 DHRS2Q13268 280 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 RAB35Q15286 201 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 CDNFQ49AH0 187 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 ACTBL2Q562R1 376 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 FAM209AQ5JX71 171 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 LY6G6FQ5SQ64 297 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 OR10K2Q6IF99 312 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 LIN54Q6MZP7 749 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 RFPL4BQ6ZWI9 263 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 DOK3Q7L591 496 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 SLC16A14Q7RTX9 510 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 DPPA2Q7Z7J5 298 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 SLC51BQ86UW2 128 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 CCDC54Q8NEL0 328 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 OR10R2Q8NGX6 335 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 RBPMSQ93062 196 aaKnown RBP14.63□□□□□ -0.07
CPSF4-201ENST00000292476 ARL6Q9H0F7 186 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 SLC7A10Q9NS82 523 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 PLEK2Q9NYT0 353 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 CFAP46Q8IYW2 2715 aa14.63□□□□□ -0.07
CPSF4-201ENST00000292476 SGCEO43556 437 aa14.62□□□□□ -0.07
CPSF4-201ENST00000292476 SLC25A4P12235 298 aa14.62□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF93P35789 620 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF345Q14585 488 aa14.62□□□□□ -0.07
CPSF4-201ENST00000292476 PLEKHN1Q494U1 663 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-201ENST00000292476 LYG2Q86SG7 212 aa14.62□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF283Q8N7M2 679 aa14.62□□□□□ -0.07
CPSF4-201ENST00000292476 STEAP2Q8NFT2 490 aa14.62□□□□□ -0.07
CPSF4-201ENST00000292476 WDR89Q96FK6 387 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-201ENST00000292476 TRIB1Q96RU8 372 aa14.62□□□□□ -0.07
CPSF4-201ENST00000292476 NKX3-1Q99801 234 aaPredicted RBP14.62□□□□□ -0.07
CPSF4-201ENST00000292476 IFT46Q9NQC8 304 aa14.62□□□□□ -0.07
CPSF4-201ENST00000292476 WIPF3A6NGB9 483 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 CNOT4O95628 575 aaKnown RBP14.61□□□□□ -0.07
CPSF4-201ENST00000292476 B4GALT1P15291 398 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 NAT1P18440 290 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 ZBTB25P24278 435 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 CD34P28906 385 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 UBE2MP61081 183 aaKnown RBP14.61□□□□□ -0.07
CPSF4-201ENST00000292476 RPS27AP62979 156 aaKnown RBP14.61□□□□□ -0.07
CPSF4-201ENST00000292476 UBA52P62987 128 aaKnown RBP14.61□□□□□ -0.07
CPSF4-201ENST00000292476 PNLIPRP3Q17RR3 467 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 AWAT2Q6E213 333 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 RGS7BPQ6MZT1 257 aaPredicted RBP14.61□□□□□ -0.07
CPSF4-201ENST00000292476 TMED4Q7Z7H5 227 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 OR8B12Q8NGG6 310 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 OR13C9Q8NGT0 318 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 KCNG3Q8TAE7 436 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 OR51E1Q8TCB6 317 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF837Q96EG3 531 aaPredicted RBP14.61□□□□□ -0.07
CPSF4-201ENST00000292476 MFFQ9GZY8 342 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 ATPIF1Q9UII2 106 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 SESN1Q9Y6P5 492 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF407Q9C0G0 2248 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 A0A1B0GW55 424 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 NMBP08949 121 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 HOXD4P09016 255 aaPredicted RBP14.61□□□□□ -0.07
CPSF4-201ENST00000292476 DUX4L2P0CJ85 424 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 DUX4L3P0CJ86 424 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 DUX4L4P0CJ87 422 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 DUX4L5P0CJ88 424 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 DUX4L6P0CJ89 424 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 DUX4L7P0CJ90 424 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 MPGP29372 298 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 OR3A2P47893 321 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 CX3CR1P49238 355 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 ZNF121P58317 390 aaPredicted RBP14.61□□□□□ -0.07
CPSF4-201ENST00000292476 TAS2R31P59538 309 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 EIF2S3LQ2VIR3 472 aaKnown RBP14.61□□□□□ -0.07
CPSF4-201ENST00000292476 FBXW9Q5XUX1 488 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 FAM214BQ7L5A3 538 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 OR5AS1Q8N127 324 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 FBXO17Q96EF6 278 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 RDH8Q9NYR8 311 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 GHRLQ9UBU3 117 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 DUX4Q9UBX2 424 aa14.61□□□□□ -0.07
CPSF4-201ENST00000292476 VSIG4Q9Y279 399 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms