RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 A0A096LPE4 126 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 A0A1W2PPZ6 126 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 OR2M5A3KFT3 312 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 SERPINE3A8MV23 424 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 ZNF207O43670 478 aaKnown RBP9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 BMP5P22003 454 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 EXT1Q16394 746 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 NKAIN1Q4KMZ8 207 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 OTUD1Q5VV17 481 aaPredicted RBP9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 RSPO2Q6UXX9 243 aaPredicted RBP9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 PRSS3P2Q8NHM4 247 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 SLC37A2Q8TED4 501 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 HDAC8Q9BY41 377 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 ALX4Q9H161 411 aaPredicted RBP9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 TXNIPQ9H3M7 391 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 LOC390937A0A1W2PQ73 354 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 NDUFB6O95139 128 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 DUS4LO95620 317 aaKnown RBP9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 SLC6A1P30531 599 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 INSM1Q01101 510 aaPredicted RBP9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 PTOV1Q86YD1 416 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 OSR2Q8N2R0 312 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 OR10AD1Q8NGE0 317 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 HES4Q9HCC6 221 aa9.66□□□□□ -0.86
PKNOX1-201ENST00000291547 ELOA3CA0A087WX78 387 aaPredicted RBP9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 ARRDC5A6NEK1 342 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 NCBP2LA6PVI3 153 aaKnown RBP9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 EIF3GO75821 320 aaKnown RBP eCLIP9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 ONECUT2O95948 504 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 KRASP01116 189 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 PTHLHP12272 177 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 ABCD3P28288 659 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 CHRNA7P36544 502 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 DND1Q8IYX4 353 aaKnown RBP9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 LAT2Q9GZY6 243 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 S1PR5Q9H228 398 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 UQCC1Q9NVA1 299 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 CACFD1Q9UGQ2 172 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 HOXB3P14651 431 aaPredicted RBP9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 PNLIPRP3Q17RR3 467 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 C8orf82Q6P1X6 216 aaPredicted RBP9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 ETV3LQ6ZN32 361 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 Q6ZN92 141 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 ROBO4Q8WZ75 1007 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 ADIPOR1Q96A54 375 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 WDR61Q9GZS3 305 aaKnown RBP9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 TWSG1Q9GZX9 223 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 FGF22Q9HCT0 170 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 PTPRFP10586 1907 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 TMEM218A2RU14 115 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 GFYI3L273 518 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 HPP00738 406 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 FAM87AP0C7U9 286 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 PPICP45877 212 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 SLC6A12P48065 614 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 CCL11P51671 97 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 ST3GAL2Q16842 350 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 BTNL3Q6UXE8 466 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 REC114Q7Z4M0 266 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 ZDHHC23Q8IYP9 409 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 OR13H1Q8NG92 308 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 RSRP1Q9BUV0 290 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 GSX1Q9H4S2 264 aaPredicted RBP9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 TREM2Q9NZC2 230 aa9.65□□□□□ -0.86
PKNOX1-201ENST00000291547 LRRC3CA6NJW4 275 aa9.65□□□□□ -0.87
PKNOX1-201ENST00000291547 TMEM127O75204 238 aa9.65□□□□□ -0.87
PKNOX1-201ENST00000291547 TMEM52BQ4KMG9 183 aa9.65□□□□□ -0.87
PKNOX1-201ENST00000291547 TMEM97Q5BJF2 176 aa9.65□□□□□ -0.87
PKNOX1-201ENST00000291547 LYRM7Q5U5X0 104 aa9.65□□□□□ -0.87
PKNOX1-201ENST00000291547 ABLIM2Q6H8Q1 611 aa9.65□□□□□ -0.87
PKNOX1-201ENST00000291547 CPEB3Q8NE35 698 aaKnown RBP9.65□□□□□ -0.87
PKNOX1-201ENST00000291547 MOB3AQ96BX8 217 aa9.65□□□□□ -0.87
PKNOX1-201ENST00000291547 SMIM12Q96EX1 92 aa9.65□□□□□ -0.87
PKNOX1-201ENST00000291547 P4HTMQ9NXG6 502 aa9.65□□□□□ -0.87
PKNOX1-201ENST00000291547 FAM157BP0CG42 384 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 FAHP16930 419 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 CD200P41217 278 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 RPL34P49207 117 aaKnown RBP9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 FAM109BQ6ICB4 259 aaPredicted RBP9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 SIRT6Q8N6T7 355 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 NXPE3Q969Y0 559 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 MS4A7Q9GZW8 240 aaPredicted RBP9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 IGLV3-10A0A075B6K4 115 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 MAP1LC3B2A6NCE7 125 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 F11P03951 625 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 ARR3P36575 388 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 ZNF121P58317 390 aaPredicted RBP9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 LGALSLQ3ZCW2 172 aaPredicted RBP9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 OR1L4Q8NGR5 311 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 MAP1LC3BQ9GZQ8 125 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 TNFRSF12AQ9NP84 129 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 ASXL3Q9C0F0 2248 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 MED19A0JLT2 244 aaPredicted RBP9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 TARM1B6A8C7 271 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 CRYAAP02489 173 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 WNT1P04628 370 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 CRYBA1P05813 215 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 ATF1P18846 271 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 HTR1DP28221 377 aa9.64□□□□□ -0.87
PKNOX1-201ENST00000291547 IRS1P35568 1242 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms