RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 LRP12Q9Y561 859 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 PLPP2O43688 288 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 GPRIN2O60269 458 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 COX6B1P14854 86 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 PSMA6P60900 246 aaKnown RBP7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 ADORA2A-AS1P86434 159 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 LILRB2Q8N423 598 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 OR10S1Q8NGN2 331 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 OR1F12Q8NHA8 337 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF420Q8TAQ5 688 aaPredicted RBP7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 ATF6BQ99941 703 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 WNT5BQ9H1J7 359 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 TUBG2Q9NRH3 451 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 SLCO1C1Q9NYB5 712 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 A0A0U1RQK1 487 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 CBR1P16152 277 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 DUSP1P28562 367 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 MMP16P51512 607 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 PRSS12P56730 875 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 CLDN12P56749 244 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 TLE1Q04724 770 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 GSG1Q2KHT4 349 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 PAN3Q58A45 887 aaKnown RBP7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 DMKNQ6E0U4 476 aaPredicted RBP7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 CATSPERDQ86XM0 798 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 DOK1Q99704 481 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 AIFM2Q9BRQ8 373 aa7.33□□□□□ -1.24
PTPDC1-201ENST00000288976 C1QL1O75973 258 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 IL1AP01583 271 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ISG15P05161 165 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 PRF1P14222 555 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 HLA-DMAP28067 261 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 UGT2B10P36537 528 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 MAP2K3P46734 347 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 TMEM244Q5VVB8 128 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 GDPGP1Q6ZNW5 385 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 Q6ZSR3 168 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 CPEB3Q8NE35 698 aaKnown RBP7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 RNF166Q96A37 237 aaPredicted RBP7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 SMIM19Q96E16 107 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 PELI1Q96FA3 418 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF75AQ96N20 296 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 OPA3Q9H6K4 179 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 MBD2Q9UBB5 411 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 OR5H1A6NKK0 313 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 TMEM212A6NML5 194 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 PRR32B1ATL7 298 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 PRSS44E7EML9 344 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 PYCARD-AS1I3L0S3 204 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF32P17041 273 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 PSG4Q00888 419 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 DYRK1AQ13627 763 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 CDK5R1Q15078 307 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF718Q3SXZ3 478 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 OR2B11Q5JQS5 317 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 DRAM2Q6UX65 266 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ACBD4Q8NC06 268 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 LILRB4Q8NHJ6 448 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 AKR7LQ8NHP1 331 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 TMEM171Q8WVE6 324 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ST8SIA4Q92187 359 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 CMSS1Q9BQ75 279 aaKnown RBP7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 RGCCQ9H4X1 137 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 RAB9BQ9NP90 201 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ACOXLQ9NUZ1 547 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 FAIMQ9NVQ4 179 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 FAM206AQ9NX38 181 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 HMX3A6NHT5 357 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 H3BSA7 217 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 CYB5BO43169 146 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 IGKV3-15P01624 115 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 IGLV1-44P01699 117 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF12P17014 697 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 HCCSP53701 268 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 RPL19P84098 196 aaKnown RBP7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 SSX9Q7RTT3 188 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF695Q8IW36 515 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 WDR31Q8NA23 367 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 PHYHIPQ92561 330 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 AMELYQ99218 206 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ISG20L2Q9H9L3 353 aaKnown RBP7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 TBCCD1Q9NVR7 557 aa7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 ERRFI1Q9UJM3 462 aaPredicted RBP7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 NCOA6Q14686 2063 aaPredicted RBP7.32□□□□□ -1.24
PTPDC1-201ENST00000288976 A0A1B0GVG6 124 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 NCBP2LA6PVI3 153 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 IFNA5P01569 189 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 IGHV3-13P01766 116 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 IGHV3-7P01780 117 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 UCHL1P09936 223 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 UBCP0CG48 685 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ZNF14P17017 642 aaPredicted RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 TMBIM6P55061 237 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 RAB4BP61018 213 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 CD83Q01151 205 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 SNTB2Q13425 540 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ALKBH1Q13686 389 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 CNN3Q15417 329 aaKnown RBP7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 ZFP69Q49AA0 526 aa7.31□□□□□ -1.24
PTPDC1-201ENST00000288976 YIF1BQ5BJH7 314 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms