RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 CLCF1Q9UBD9 225 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 AMDHD2Q9Y303 409 aa11.22□□□□□ -0.61
SLC6A1-201ENST00000287766 RAB27BO00194 218 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 FOXS1O43638 330 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 EDN3P14138 238 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 PPP1R1AQ13522 171 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 Q5BKY6 102 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 FAM210BQ96KR6 192 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 MS4A10Q96PG2 267 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 HEYLQ9NQ87 328 aaPredicted RBP11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 C7orf77A4D0Y5 90 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 FRG2CA6NGY1 282 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 SEC14L6B5MCN3 397 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 HSD17B6O14756 317 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 MPC2O95563 127 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 EFEMP2O95967 443 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 CD200R1LQ6Q8B3 271 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 GVQW1Q8N7I0 195 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 DMBX1Q8NFW5 382 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 EMG1Q92979 244 aaKnown RBP11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 RAB33BQ9H082 229 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 FAM234AQ9H0X4 552 aa11.21□□□□□ -0.61
SLC6A1-201ENST00000287766 CTAG2O75638 210 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 GUSBP08236 651 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 CCR5P51681 352 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 IL10RAQ13651 578 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 MOGAT2Q3SYC2 334 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 SMIM15Q7Z3B0 74 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 SP7Q8TDD2 431 aaPredicted RBP11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 MENTQ9BUN1 341 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 S1PR5Q9H228 398 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 DICER1Q9UPY3 1922 aaKnown RBP11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 CLDN34H7C241 214 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 SULT1A3P0DMM9 295 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 SULT1A4P0DMN0 295 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 POU3F2P20265 443 aaPredicted RBP11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 SELENOVP59797 346 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 GAB4Q2WGN9 574 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 TMEM128Q5BJH2 165 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 SPICQ8N5J4 248 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 RTN4IP1Q8WWV3 396 aaPredicted RBP11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 C11orf40Q8WZ69 217 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 WNT2BQ93097 391 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 ZC3HAV1LQ96H79 300 aaKnown RBP11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 NECAP2Q9NVZ3 263 aa11.21□□□□□ -0.62
SLC6A1-201ENST00000287766 NSG1A0A0A6YYJ2 146 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 HMSDA8MTL9 139 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 C17orf112F2Z3M2 114 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 PTGER4P35408 488 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 RPP30P78346 268 aaKnown RBP11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 ZNF626Q68DY1 528 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 C19orf48Q6RUI8 117 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 ZNF813Q6ZN06 617 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 SNX22Q96L94 193 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 SLC35B3Q9H1N7 401 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 MTFP1Q9UDX5 166 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 OPN4Q9UHM6 478 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 CCDC187A0A096LP49 1063 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 TNFSF14O43557 240 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 YIF1AO95070 293 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 OR5H8P0DN80 308 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 ADRA2CP18825 462 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 HTR5AP47898 357 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 PCP4P48539 62 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 RAB32Q13637 225 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 RPL7L1Q6DKI1 246 aaKnown RBP11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 BTNL8Q6UX41 500 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 NR2C2APQ86WQ0 139 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 SLC22A18ASQ8N1D0 253 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 PGLYRP3Q96LB9 341 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 ELOVL1Q9BW60 279 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 CFHR5Q9BXR6 569 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 CA10Q9NS85 328 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 R4GMQ9 66 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 TMEM272A0A1B0GTI8 110 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 XKRY2A2RUG3 117 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 METTL15P1P0C7V9 234 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 GPR3P46089 330 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 CYB5R2Q6BCY4 276 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 NANOS1Q8WY41 292 aaKnown RBP11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 PBOV1Q9GZY1 135 aa11.2□□□□□ -0.62
SLC6A1-201ENST00000287766 LMO7DNF2Z398 122 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 PMCHP20382 165 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 SLC37A1P57057 533 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 GUCA2BQ16661 112 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 TMEM164Q5U3C3 297 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 KLHDC1Q8N7A1 406 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 OR11H4Q8NGC9 324 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 C22orf15Q8WYQ4 148 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 AMELYQ99218 206 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 CHST6Q9GZX3 395 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 A0A1W2PPE2 198 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 C5orf67F2Z3F1 127 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 CST4P01036 141 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 NMBP08949 121 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 MNX1P50219 401 aaPredicted RBP11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 SLC25A1P53007 311 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 PNLIPRP2P54317 469 aa11.19□□□□□ -0.62
SLC6A1-201ENST00000287766 PIGPP57054 158 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms