RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 SGK3Q96BR1 496 aa11.86□□□□□ -0.51
SCAF4-201ENST00000286835 PRRX2Q99811 253 aa11.86□□□□□ -0.51
SCAF4-201ENST00000286835 RCC2Q9P258 522 aaKnown RBP11.86□□□□□ -0.51
SCAF4-201ENST00000286835 GHRLQ9UBU3 117 aa11.86□□□□□ -0.51
SCAF4-201ENST00000286835 MMACHCQ9Y4U1 282 aa11.86□□□□□ -0.51
SCAF4-201ENST00000286835 IGHV3-15A0A0B4J1V0 119 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 PIAS2O75928 621 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 TBPP20226 339 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 FPR2P25090 351 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 USF2Q15853 346 aaPredicted RBP11.85□□□□□ -0.51
SCAF4-201ENST00000286835 EMG1Q92979 244 aaKnown RBP11.85□□□□□ -0.51
SCAF4-201ENST00000286835 RNF126Q9BV68 326 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 MAGT1Q9H0U3 335 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 LPAR5Q9H1C0 372 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 RANBP2P49792 3224 aaKnown RBP11.85□□□□□ -0.51
SCAF4-201ENST00000286835 NUDT19A8MXV4 375 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 ADAM10O14672 748 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 OR2C1O95371 312 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 ZNF728P0DKX0 622 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 OR5H8P0DN80 308 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 EPHA1P21709 976 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 DVL1P1P54792 670 aaPredicted RBP11.85□□□□□ -0.51
SCAF4-201ENST00000286835 PLGLB1Q02325 96 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 C9orf152Q5JTZ5 239 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 PLXDC2Q6UX71 529 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 OR5L2Q8NGL0 311 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 IP6K3Q96PC2 410 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 SLCO1B1Q9Y6L6 691 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 SPRY1O43609 319 aaPredicted RBP11.85□□□□□ -0.51
SCAF4-201ENST00000286835 CST4P01036 141 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 UBE2KP61086 200 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 KISS1Q15726 138 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 HOGA1Q86XE5 327 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 ZFP62Q8NB50 900 aaPredicted RBP11.85□□□□□ -0.51
SCAF4-201ENST00000286835 SLC30A7Q8NEW0 376 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 MRPL24Q96A35 216 aaKnown RBP11.85□□□□□ -0.51
SCAF4-201ENST00000286835 VN1R1Q9GZP7 353 aa11.85□□□□□ -0.51
SCAF4-201ENST00000286835 TP53I11O14683 189 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 GPR37O15354 613 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 F10P00742 488 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 GUSBP08236 651 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 CHATP28329 748 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 HLA-BQ31612 363 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 GGNBP1Q5YKI7 109 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 ZNF813Q6ZN06 617 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 NAA11Q9BSU3 229 aaPredicted RBP11.84□□□□□ -0.51
SCAF4-201ENST00000286835 B2MP61769 119 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 MYBPHQ13203 477 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 C1orf100Q5SVJ3 147 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 DHRS7BQ6IAN0 325 aaPredicted RBP11.84□□□□□ -0.51
SCAF4-201ENST00000286835 FAHD2BQ6P2I3 314 aaPredicted RBP11.84□□□□□ -0.51
SCAF4-201ENST00000286835 ZNF519Q8TB69 540 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 FAHD2AQ96GK7 314 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 CYYR1Q96J86 154 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 BARX1Q9HBU1 254 aaPredicted RBP11.84□□□□□ -0.51
SCAF4-201ENST00000286835 S100A8P05109 93 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 FSTP19883 344 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 CSNK1A1P48729 337 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 C4orf17Q53FE4 359 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 PAQR4Q8N4S7 273 aaPredicted RBP11.84□□□□□ -0.51
SCAF4-201ENST00000286835 OR13G1Q8NGZ3 307 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 AKR7LQ8NHP1 331 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 ASB10Q8WXI3 467 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 ARRDC1-AS1Q9H2J1 176 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 ZMAT5Q9UDW3 170 aaKnown RBP11.84□□□□□ -0.51
SCAF4-201ENST00000286835 GPR132Q9UNW8 380 aa11.84□□□□□ -0.51
SCAF4-201ENST00000286835 TAAR5O14804 337 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 NDUFA2O43678 99 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 RAD51DO75771 328 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 OR7C1O76099 320 aaPredicted RBP11.83□□□□□ -0.52
SCAF4-201ENST00000286835 DXOO77932 396 aaKnown RBP11.83□□□□□ -0.52
SCAF4-201ENST00000286835 TAGLN2P37802 199 aaKnown RBP11.83□□□□□ -0.52
SCAF4-201ENST00000286835 OPN5Q6U736 354 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 RABEPKQ7Z6M1 372 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 BORCS8Q96FH0 119 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 TCEAL7Q9BRU2 100 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 FAAP24Q9BTP7 215 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 SLC7A11Q9UPY5 501 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 RCL1Q9Y2P8 373 aaKnown RBP11.83□□□□□ -0.52
SCAF4-201ENST00000286835 IGHV4-34P06331 123 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 DBHP09172 617 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 GLB1P16278 677 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 ZNF16P17020 682 aaPredicted RBP11.83□□□□□ -0.52
SCAF4-201ENST00000286835 MMP16P51512 607 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 RNF4P78317 190 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 NKAIN1Q4KMZ8 207 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 HIST2H3AQ71DI3 136 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 OR1N1Q8NGS0 311 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 RNF133Q8WVZ7 376 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 RTN4IP1Q8WWV3 396 aaPredicted RBP11.83□□□□□ -0.52
SCAF4-201ENST00000286835 DYRK2Q92630 601 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 RALGAPA1Q6GYQ0 2036 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 KIAA1549LQ6ZVL6 1849 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 P2RY4P51582 365 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 DMWDQ09019 674 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 MFAP5Q13361 173 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 PLAC9Q5JTB6 97 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 SKA3Q8IX90 412 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 OR2G3Q8NGZ4 309 aa11.83□□□□□ -0.52
SCAF4-201ENST00000286835 OR6S1Q8NH40 331 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms