RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PARP11Q9NR21 331 aa11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 LSM5Q9Y4Y9 91 aaKnown RBP11.61□□□□□ -0.55
SLC28A1-201ENST00000286749 TIAF1O95411 115 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 GLB1P16278 677 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 GABRR1P24046 479 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 AKR1C3P42330 323 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 ALDH3B1P43353 468 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 MEOX2P50222 304 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 ZNF84P51523 738 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 CLDN17P56750 224 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 SKA3Q8IX90 412 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 OR2M3Q8NG83 312 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 SFT2D1Q8WV19 159 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 MRPL24Q96A35 216 aaKnown RBP11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 KIRREL1Q96J84 757 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 AKR1E2Q96JD6 320 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 GHRLQ9UBU3 117 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 IGLV3-12A0A075B6K2 115 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 IGLV3-32A0A0A0MS00 114 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 OR5H15A6NDH6 313 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 FAM157AC9JC47 383 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 DEDDO75618 318 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 SCGB1D2O95969 90 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 CPT2P23786 658 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 THBS4P35443 961 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 TMEM33P57088 247 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 B2MP61769 119 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 SMCO1Q147U7 214 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 LCN10Q6JVE6 187 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 SGPP2Q8IWX5 399 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 PRRX2Q99811 253 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 AMDHD2Q9Y303 409 aa11.6□□□□□ -0.55
SLC28A1-201ENST00000286749 AQP7P3A6NL99 342 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 DHRS3O75911 302 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 IGLV3-1P01715 115 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 GGNBP1Q5YKI7 109 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 CLEC9AQ6UXN8 241 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 KMT5CQ86Y97 462 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 SLC25A45Q8N413 288 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 OR5L2Q8NGL0 311 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 SECTM1Q8WVN6 248 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 CLCC1Q96S66 551 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 CRB3Q9BUF7 120 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 TM2D1Q9BX74 207 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 IFT22Q9H7X7 185 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 MYOTQ9UBF9 498 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 PIGLQ9Y2B2 252 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 JTBO76095 146 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 DVL1P1P54792 670 aaPredicted RBP11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 HABP2Q14520 560 aaPredicted RBP11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 SWI5Q1ZZU3 235 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 SLC16A14Q7RTX9 510 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 LRRC18Q8N456 261 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 C14orf79Q96F83 325 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 SMCO4Q9NRQ5 59 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 PLEKHJ1Q9NW61 149 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 TUBD1Q9UJT1 453 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 V9GYS6 101 aa11.59□□□□□ -0.55
SLC28A1-201ENST00000286749 CRYM-AS1A6NIL9 109 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 MSTNO14793 375 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 IFNA21P01568 189 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 GAPDHP04406 335 aaKnown RBP11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 CTSDP07339 412 aaPredicted RBP11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 PPT1P50897 306 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 PHYHD1Q5SRE7 291 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 WDR74Q6RFH5 385 aaPredicted RBP11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 RABEPKQ7Z6M1 372 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 HAS2Q92819 552 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 ERGIC1Q969X5 290 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 CHST5Q9GZS9 411 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 CACFD1Q9UGQ2 172 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 ATPIF1Q9UII2 106 aa11.58□□□□□ -0.55
SLC28A1-201ENST00000286749 CNTRLQ7Z7A1 2325 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 TLX3O43711 291 aaPredicted RBP11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 EIF3GO75821 320 aaKnown RBP eCLIP11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 ZFAND5O76080 213 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 IFNA4P05014 189 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 MSR1P21757 451 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 CTSSP25774 331 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 EIF3IQ13347 325 aaKnown RBP11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 PRAMEF20Q5VT98 475 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 OPN5Q6U736 354 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 CPEB2Q7Z5Q1 589 aaKnown RBP11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 WDSUB1Q8N9V3 476 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 BSCL2Q96G97 398 aaPredicted RBP11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 RNF122Q9H9V4 155 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 PADI1Q9ULC6 663 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 B3GALT1Q9Y5Z6 326 aa11.58□□□□□ -0.56
SLC28A1-201ENST00000286749 A0A0U1RQV5 110 aa11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 ZNF205O95201 554 aa11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 DBHP09172 617 aa11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 TMEM225BP0DP42 221 aa11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 GUCA1AP43080 201 aaPredicted RBP11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 CSNK1A1P48729 337 aa11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 RAB5BP61020 215 aa11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 SNRPEP62304 92 aaKnown RBP11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 LSM6P62312 80 aaKnown RBP11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 ENDOGQ14249 297 aaKnown RBP11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 ARL6IP1Q15041 203 aa11.57□□□□□ -0.56
SLC28A1-201ENST00000286749 GJC3Q8NFK1 279 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms