RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 CDC20BQ86Y33 519 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 KDF1Q8NAX2 398 aaPredicted RBP14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 MVB12AQ96EY5 273 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 NKX6-3A6NJ46 265 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 CFDP00746 253 aaPredicted RBP14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 ZGLP1P0C6A0 271 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 CCKARP32238 428 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 SLC25A1P53007 311 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 ANKRD33Q7Z3H0 272 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 CNIH1O95406 144 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 OR5G3P0C626 314 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 DAOP14920 347 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 CDKN2AP42771 156 aaKnown RBP14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 LSRQ86X29 649 aaPredicted RBP14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 FOXQ1Q9C009 403 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 IL17BQ9UHF5 180 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 SCN9AQ15858 1988 aa14.74□□□□□ -0.05
SH3RF1-201ENST00000284637 TBX19O60806 448 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 CTSVO60911 334 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 DHODHQ02127 395 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 NSUN5P2Q63ZY6 315 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 C20orf196Q8IYI0 205 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 ZDHHC23Q8IYP9 409 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 ROBO4Q8WZ75 1007 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 ERGIC1Q969X5 290 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 FAM173AQ9BQD7 235 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 DMRT1Q9Y5R6 373 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 ARPC3O15145 178 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 HOXB1P14653 301 aaPredicted RBP14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 CXCL2P19875 107 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 FPR2P25090 351 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 CLDN15P56746 228 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 GUCA2BQ16661 112 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 NGBQ9NPG2 151 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 DNAJB12Q9NXW2 375 aaKnown RBP14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 H3BMH7 237 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 K7EQM0 130 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 EIF3GO75821 320 aaKnown RBP eCLIP14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 DRAM2Q6UX65 266 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 UBALD1Q8TB05 177 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 ANKRD36CQ5JPF3 1778 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 OR5H15A6NDH6 313 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 OR5H1A6NKK0 313 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 MPTX1A8MV57 137 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 NTN1O95631 604 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 MYF5P13349 255 aa14.73□□□□□ -0.05
SH3RF1-201ENST00000284637 C9orf170A2RU37 121 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 WNT11O96014 354 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 RPS16P62249 146 aaKnown RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 HLA-CQ95604 372 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 NMES1Q9C002 83 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 LRP5O75197 1615 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 DUS4LO95620 317 aaKnown RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 S100A7P31151 101 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 ZNF117Q03924 483 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 NOXO1Q8NFA2 376 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 GINS3Q9BRX5 216 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 KCNK15Q9H427 330 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 COL22A1Q8NFW1 1626 aaPredicted RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 MASP2O00187 686 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 ABCD4O14678 606 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 FFAR1O14842 300 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 TMEM240Q5SV17 173 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 OR4D9Q8NGE8 314 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 PINX1Q96BK5 328 aaKnown RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 CCDC74BQ96LY2 380 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 SIRT3Q9NTG7 399 aaPredicted RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 BET1LQ9NYM9 111 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 PPIL1Q9Y3C6 166 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 KNTC1P50748 2209 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 UBE2L5PA0A1B0GUS4 154 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 CHEK1O14757 476 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 ACAA1P09110 424 aaPredicted RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 ZNF816Q0VGE8 651 aaPredicted RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 KLF9Q13886 244 aaPredicted RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 TCTEX1D1Q8N7M0 179 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 TMEM104Q8NE00 496 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 PP6455Q8WZ26 134 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 ADAT1Q9BUB4 502 aaKnown RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 ZNF576Q9H609 170 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 ZNF275Q9NSD4 429 aaPredicted RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 LANCL1O43813 399 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 OPN1MWP04001 364 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 CLEC3BP05452 202 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 OPN1MW2P0DN77 364 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 OPN1MW3P0DN78 364 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 HIST1H1DP16402 221 aaKnown RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 PTCRAQ6ISU1 281 aaPredicted RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 CISD2Q8N5K1 135 aaKnown RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 GVQW1Q8N7I0 195 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 SERGEFQ9UGK8 458 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 ARL2-SNX15V9GYD0 113 aa14.72□□□□□ -0.05
SH3RF1-201ENST00000284637 A0A1W2PPC4 97 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 LRRC30A6NM36 301 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 RER1O15258 196 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 IL3RAP26951 378 aa14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 SUB1P53999 127 aaKnown RBP eCLIP14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 TIAL1Q01085 375 aaKnown RBP eCLIP14.71□□□□□ -0.05
SH3RF1-201ENST00000284637 CEACAM16Q2WEN9 425 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms