RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 ISLRO14498 428 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SLC6A12P48065 614 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF121P58317 390 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 MICBQ29980 383 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 CLEC12BQ2HXU8 276 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 DOT1LQ8TEK3 1739 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF195O14628 629 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 TBX19O60806 448 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 TCTAP57738 103 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF766Q5HY98 468 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 FBXL14Q8N1E6 418 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 ARFGAP1Q8N6T3 406 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 FAM53CQ9NYF3 392 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 C7orf72A4D263 438 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 AQP6Q13520 282 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 BCDIN3DQ7Z5W3 292 aaKnown RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 TP53INP2Q8IXH6 220 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 FAM26EQ8N5C1 309 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 DUSP18Q8NEJ0 188 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 PHOSPHO2Q8TCD6 241 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 TEAD3Q99594 435 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 LMX1BO60663 402 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 KRASP01116 189 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 CD3DP04234 171 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 COX6CP09669 75 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SMIM6P0DI80 62 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 METAP1P53582 386 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 PPP2CBP62714 309 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 STAC2Q6ZMT1 411 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 BTLAQ7Z6A9 289 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 TMEM229BQ8NBD8 167 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 DTD1Q8TEA8 209 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 ANAPC16Q96DE5 110 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 C1QTNF6Q9BXI9 259 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 HAPLN2Q9GZV7 340 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 TRAV1-2A0A0B4J238 106 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 K7ESF4 209 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SOX15O60248 233 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 LYZL6O75951 148 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 CD96P40200 585 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SLC19A1P41440 591 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 SUMO3P55854 103 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 RELBQ01201 579 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 ARIH2OSQ8N7S6 290 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 TMEM102Q8N9M5 508 aaPredicted RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 HSD17B10Q99714 261 aaKnown RBP7.88□□□□□ -1.15
NIPBL-201ENST00000282516 TAAR3PQ9P1P4 343 aa7.88□□□□□ -1.15
NIPBL-201ENST00000282516 A0A0U1RQS6 177 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 TMEM189-UBE2V1I3L0A0 370 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 LINC01387J3KSC0 135 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 TNFSF11O14788 317 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 CD22P20273 847 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 OR4D10Q8NGI6 311 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 WDR89Q96FK6 387 aaPredicted RBP7.87□□□□□ -1.15
NIPBL-201ENST00000282516 GPR87Q9BY21 358 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 Q9N2K0 584 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 TRAPPC4Q9Y296 219 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 FAM221AA4D161 298 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 FUT3P21217 361 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 SRP14P37108 136 aaKnown RBP7.87□□□□□ -1.15
NIPBL-201ENST00000282516 LYZP61626 148 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 C19orf54Q5BKX5 351 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 FADS6Q8N9I5 356 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ISL2Q96A47 359 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 IL36GQ9NZH8 169 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 A0A087X0M5 115 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 A0A1B0GX30 115 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 K7EQS6 105 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 PRKRAO75569 313 aaKnown RBP7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ONECUT2O95948 504 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 CD27P26842 260 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 PNRC1Q12796 327 aaPredicted RBP7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ZDHHC22Q8N966 263 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 OR1B1Q8NGR6 318 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF296Q8WUU4 475 aaPredicted RBP7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ARFGEF3Q5TH69 2177 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ICOSLGO75144 302 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 UBE2L3P68036 154 aaKnown RBP7.87□□□□□ -1.15
NIPBL-201ENST00000282516 FAM71E1Q6IPT2 247 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ADPRHL1Q8NDY3 354 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 RNF186Q9NXI6 227 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 LTBP3Q9NS15 1303 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ANKRD36A6QL64 1941 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 CST7O76096 145 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ELFN2Q5R3F8 820 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 CARFQ8N187 725 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 TMEM251Q8N6I4 163 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 RAB24Q969Q5 203 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 IZUMO4Q1ZYL8 232 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF260Q3ZCT1 412 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 RLN3Q8WXF3 142 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 TMEM9BQ9NQ34 198 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 RHBDL1O75783 438 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 CRYABP02511 175 aaKnown RBP7.87□□□□□ -1.15
NIPBL-201ENST00000282516 ZNF26P17031 533 aaPredicted RBP7.87□□□□□ -1.15
NIPBL-201ENST00000282516 FNDC7Q5VTL7 733 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 OR2W3Q7Z3T1 314 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 PERPQ96FX8 193 aa7.87□□□□□ -1.15
NIPBL-201ENST00000282516 C4AP0C0L4 1744 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms