RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 TMEM269A0A1B0GVZ9 245 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 OR5B21A6NL26 309 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 TSPAN9O75954 239 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 CSF1P09603 554 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 PSG2P11465 335 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 FAHP16930 419 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 GABRA5P31644 462 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 HCCSP53701 268 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 ACSM1Q08AH1 577 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 LY6EQ16553 131 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 SMIM21Q3B7S5 101 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 ZNF829Q3KNS6 432 aaPredicted RBP10.43□□□□□ -0.74
CD44-203ENST00000278386 FAM76BQ5HYJ3 339 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 TMEM236Q5W0B7 351 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 HAGHLQ6PII5 290 aaPredicted RBP10.43□□□□□ -0.74
CD44-203ENST00000278386 C1orf122Q6ZSJ8 110 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 MOB3CQ70IA8 216 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 CCDC197Q8NCU1 140 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 OR5D13Q8NGL4 314 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 ZNF671Q8TAW3 534 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 CANT1Q8WVQ1 401 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 THTPAQ9BU02 230 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 MROQ9BYG7 248 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 PBOV1Q9GZY1 135 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 YY1AP1Q9H869 796 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 FAM53CQ9NYF3 392 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 IKZF2Q9UKS7 526 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 PIGLQ9Y2B2 252 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 SF3B6Q9Y3B4 125 aaKnown RBP10.43□□□□□ -0.74
CD44-203ENST00000278386 NOTCH1P46531 2555 aa10.43□□□□□ -0.74
CD44-203ENST00000278386 GSC2O15499 205 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 ALOX5APP20292 161 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 SLC2A5P22732 501 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 RIDAP52758 137 aaKnown RBP10.42□□□□□ -0.74
CD44-203ENST00000278386 CDK5Q00535 292 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 RIPPLY1Q0D2K3 151 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 SNAPC1Q16533 368 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 LRRC75BQ2VPJ9 315 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 CEACAM21Q3KPI0 293 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 Q6ZTK2 550 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 TRPM8Q7Z2W7 1104 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 SPATA24Q86W54 205 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 BEND2Q8NDZ0 799 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 OR4C13Q8NGP0 309 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 OR51E1Q8TCB6 317 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 RORBQ92753 470 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 SSX3Q99909 188 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 YIPF3Q9GZM5 350 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 OR51I2Q9H344 312 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 SLC25A19Q9HC21 320 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 GPR84Q9NQS5 396 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 FAM206AQ9NX38 181 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 TVP23BQ9NYZ1 205 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 ENPP5Q9UJA9 477 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 ZNF222Q9UK12 451 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 DSCAML1Q8TD84 2053 aa10.42□□□□□ -0.74
CD44-203ENST00000278386 A0A0G2JK05 382 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 A0A1W2PPH5 198 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 ACOD1A6NK06 481 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 AQP12BA6NM10 295 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 SLC1A7O00341 560 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 ANXA8P13928 327 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 ATP6V1B1P15313 513 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 PRKACGP22612 351 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 COX7A1P24310 79 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 CEBPDP49716 269 aaPredicted RBP10.41□□□□□ -0.74
CD44-203ENST00000278386 ESRRGP62508 458 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 CBX1P83916 185 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 MFGE8Q08431 387 aaPredicted RBP10.41□□□□□ -0.74
CD44-203ENST00000278386 FLOT2Q14254 428 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 ZNF684Q5T5D7 378 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 SLC35E4Q6ICL7 350 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 ACP7Q6ZNF0 438 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 AQP12AQ8IXF9 295 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 MKXQ8IYA7 352 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 BATF2Q8N1L9 274 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 OR5A2Q8NGI9 324 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 C17orf50Q8WW18 174 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 AQP3Q92482 292 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 ZNF488Q96MN9 340 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 CNN2Q99439 309 aaKnown RBP10.41□□□□□ -0.74
CD44-203ENST00000278386 FAM234AQ9H0X4 552 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 C19orf12Q9NSK7 152 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 COPS3Q9UNS2 423 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 MAB21L2Q9Y586 359 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 TMEM14AQ9Y6G1 99 aa10.41□□□□□ -0.74
CD44-203ENST00000278386 CCDC182A6NF36 153 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 RFPL4AA6NLU0 287 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 LOC110117498-PIK3R3F6TDL0 507 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 RFPL4AL1F8VTS6 287 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 MTRF1O75570 445 aaKnown RBP10.4□□□□□ -0.74
CD44-203ENST00000278386 DHRS3O75911 302 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 NXPH2O95156 264 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 NRASP01111 189 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 T-ENOLP0DO92 83 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 HOXB6P17509 224 aaKnown RBP10.4□□□□□ -0.74
CD44-203ENST00000278386 PAX6P26367 422 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 HAAOP46952 286 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 BMXP51813 675 aa10.4□□□□□ -0.74
CD44-203ENST00000278386 RPL31P62899 125 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms