RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 CLEC1AQ8NC01 280 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 PGLYRP3Q96LB9 341 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 OR5V1Q9UGF6 321 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 SLC31A2O15432 143 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 IFNA2P01563 188 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 HLA-HP01893 362 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 VSIG10L2P0DP72 767 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ZNF121P58317 390 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 IGLV3-21P80748 117 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 SLC17A1Q14916 467 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 OPN5Q6U736 354 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 OTOSQ8NHW6 89 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 GAR1Q9NY12 217 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 GDF2Q9UK05 429 aaPredicted RBP12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 NKX2-8O15522 239 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 IGHV2-70P01814 119 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 RPS4XP62701 263 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 MRPS10P82664 201 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ALKBH6Q3KRA9 238 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 TMPRSS13Q9BYE2 586 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 TCFL5Q9UL49 500 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 RBM7Q9Y580 266 aaKnown RBP12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 CSAG2Q9Y5P2 127 aa12.5□□□□□ -0.41
TNFRSF11A-201ENST00000269485 PHYHO14832 338 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ZNF44P15621 663 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 MGMTP16455 207 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ADRA2CP18825 462 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 MAGEA5P43359 124 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 EFNB1P98172 346 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 LINC01590Q5TEZ4 76 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ZNF100Q8IYN0 542 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 MAML2Q8IZL2 1156 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 PRSS35Q8N3Z0 413 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 C1orf198Q9H425 327 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 KCNK7Q9Y2U2 307 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 PUS1Q9Y606 427 aaKnown RBP eCLIP12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 OR5H14A6NHG9 310 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 MED6O75586 246 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 IGHA1P01876 353 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 CSTBP04080 98 aaKnown RBP12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 SNRPCP09234 159 aaKnown RBP12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 FCGR2AP12318 317 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 CD34P28906 385 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 CXADRP78310 365 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 GABREP78334 506 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 HIST2H3AQ71DI3 136 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 EPG5Q9HCE0 2579 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 TMEM265A0A087WTH1 108 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 A0A0D9SG52 128 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 CYB5AP00167 134 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ASAH2BP0C7U1 165 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 S100A10P60903 97 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 PPIAP62937 165 aaKnown RBP12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 SURF2Q15527 256 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 DMKNQ6E0U4 476 aaPredicted RBP12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ZNF774Q6NX45 483 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 TMEM68Q96MH6 324 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 TIMP4Q99727 224 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ST6GALNAC2Q9UJ37 374 aa12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 EXOGQ9Y2C4 368 aaKnown RBP12.49□□□□□ -0.41
TNFRSF11A-201ENST00000269485 PLPP2O43688 288 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 CNOT4O95628 575 aaKnown RBP12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 BGLAPP02818 100 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 SELEP16581 610 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 BTF3P20290 206 aaKnown RBP12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 AVPR2P30518 371 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 PRSS3P35030 304 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 OR3A2P47893 321 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 DAP3P51398 398 aaKnown RBP12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 SLC9A3R2Q15599 337 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 SLC23A3Q6PIS1 610 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 CXorf67Q86X51 503 aaPredicted RBP12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ZNF679Q8IYX0 411 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 MCHR2Q969V1 340 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 MISP3Q96FF7 219 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 GPHA2Q96T91 129 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 PCED1AQ9H1Q7 454 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 UQCC1Q9NVA1 299 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 RASL12Q9NYN1 266 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 CEP192Q8TEP8 1941 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 TRAV39A0A0B4J263 110 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 A0A0J9YW62 118 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 MS4A18H0YCH9 400 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 AP4M1O00189 453 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 HTR2CP28335 458 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 THBS2P35442 1172 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 GLP1RP43220 463 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 CX3CR1P49238 355 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 RBP2P50120 134 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 FHL1Q13642 323 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 TAF9Q16594 264 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 MS4A18Q3C1V0 323 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 MOGAT2Q3SYC2 334 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ZNF813Q6ZN06 617 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 ZNF485Q8NCK3 441 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 TREM2Q9NZC2 230 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 SFTA3P0C7M3 94 aa12.48□□□□□ -0.41
TNFRSF11A-201ENST00000269485 KIR3DL2P43630 455 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms