RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 TSPAN15O95858 294 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 SMAD4Q13485 552 aaKnown RBP24.13■■□□□ 1.45
CBX4-201ENST00000269397 C14orf28Q4W4Y0 310 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 POC1BQ8TC44 478 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 SSC4DQ8WTU2 575 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 PGAM5Q96HS1 289 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 SHDQ96IW2 340 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 TIMM10BQ9Y5J6 103 aa24.13■■□□□ 1.45
CBX4-201ENST00000269397 M0R036 132 aa24.12■■□□□ 1.45
CBX4-201ENST00000269397 C1QL1O75973 258 aa24.12■■□□□ 1.45
CBX4-201ENST00000269397 FCGR2AP12318 317 aa24.12■■□□□ 1.45
CBX4-201ENST00000269397 UBE2V2Q15819 145 aa24.12■■□□□ 1.45
CBX4-201ENST00000269397 STT3BQ8TCJ2 826 aa24.12■■□□□ 1.45
CBX4-201ENST00000269397 A0A1W2PNV4 684 aa24.12■■□□□ 1.45
CBX4-201ENST00000269397 C5orf52A6NGY3 159 aa24.12■■□□□ 1.45
CBX4-201ENST00000269397 JTBO76095 146 aa24.12■■□□□ 1.45
CBX4-201ENST00000269397 CHRNA10Q9GZZ6 450 aa24.12■■□□□ 1.45
CBX4-201ENST00000269397 A0A1W2PPH5 198 aa24.11■■□□□ 1.45
CBX4-201ENST00000269397 FOLR2P14207 255 aa24.11■■□□□ 1.45
CBX4-201ENST00000269397 CDCP2Q5VXM1 449 aa24.11■■□□□ 1.45
CBX4-201ENST00000269397 RSRP1Q9BUV0 290 aa24.11■■□□□ 1.45
CBX4-201ENST00000269397 FOXI3A8MTJ6 420 aaPredicted RBP24.11■■□□□ 1.45
CBX4-201ENST00000269397 IGLV3-19P01714 112 aa24.11■■□□□ 1.45
CBX4-201ENST00000269397 SGPP2Q8IWX5 399 aa24.11■■□□□ 1.45
CBX4-201ENST00000269397 SDHAF3Q9NRP4 125 aa24.11■■□□□ 1.45
CBX4-201ENST00000269397 FGF21Q9NSA1 209 aa24.11■■□□□ 1.45
CBX4-201ENST00000269397 ZNF581Q9P0T4 197 aa24.11■■□□□ 1.45
CBX4-201ENST00000269397 hCG_1809904A0A1W2PP81 198 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 A0A1W2PR64 198 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 A0A1W2PRV1 198 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 C7orf77A4D0Y5 90 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 THBS4P35443 961 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 RRADP55042 308 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 SLC25A47Q6Q0C1 308 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 C17orf82Q86X59 251 aaPredicted RBP24.1■■□□□ 1.45
CBX4-201ENST00000269397 TOMM40LQ969M1 308 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 EIF5A2Q9GZV4 153 aaKnown RBP24.1■■□□□ 1.45
CBX4-201ENST00000269397 RAB33BQ9H082 229 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 SPACA1Q9HBV2 294 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 IGHV1OR21-1A0A087WYE8 117 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 XRCC2O43543 280 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 DIRAS3O95661 229 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 PLPPR5Q32ZL2 321 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 FAM69BQ5VUD6 431 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 PPP1R3BQ86XI6 285 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 S100A13Q99584 98 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 LIME1Q9H400 295 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 RGCCQ9H4X1 137 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 KPTNQ9Y664 436 aa24.1■■□□□ 1.45
CBX4-201ENST00000269397 TRBV11-1A0A0K0K1C0 115 aa24.09■■□□□ 1.45
CBX4-201ENST00000269397 FABP9Q0Z7S8 132 aa24.09■■□□□ 1.45
CBX4-201ENST00000269397 EGLN1Q9GZT9 426 aa24.09■■□□□ 1.45
CBX4-201ENST00000269397 NIT2Q9NQR4 276 aa24.09■■□□□ 1.45
CBX4-201ENST00000269397 FABP1P07148 127 aa24.09■■□□□ 1.45
CBX4-201ENST00000269397 CCL1P22362 96 aa24.09■■□□□ 1.45
CBX4-201ENST00000269397 TSPO2Q5TGU0 170 aa24.09■■□□□ 1.45
CBX4-201ENST00000269397 PLEKHJ1Q9NW61 149 aa24.09■■□□□ 1.45
CBX4-201ENST00000269397 EXPH5Q8NEV8 1989 aa24.09■■□□□ 1.45
CBX4-201ENST00000269397 ARG1P05089 322 aa24.08■■□□□ 1.45
CBX4-201ENST00000269397 OR10G3Q8NGC4 313 aa24.08■■□□□ 1.45
CBX4-201ENST00000269397 MSTNO14793 375 aa24.08■■□□□ 1.45
CBX4-201ENST00000269397 ZNF14P17017 642 aaPredicted RBP24.08■■□□□ 1.45
CBX4-201ENST00000269397 ZNF43P17038 809 aa24.08■■□□□ 1.45
CBX4-201ENST00000269397 PRSS12P56730 875 aa24.08■■□□□ 1.45
CBX4-201ENST00000269397 WFDC1Q9HC57 220 aa24.08■■□□□ 1.45
CBX4-201ENST00000269397 IFNA21P01568 189 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 S100A9P06702 114 aaKnown RBP24.07■■□□□ 1.44
CBX4-201ENST00000269397 TMEM225BP0DP42 221 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 OPRM1P35372 400 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 SNCAP37840 140 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 GUK1Q16774 197 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 D2HGDHQ8N465 521 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 ZNF160Q9HCG1 818 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP24.07■■□□□ 1.44
CBX4-201ENST00000269397 PADI1Q9ULC6 663 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 A0A1W2PR77 199 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 OR5H15A6NDH6 313 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 LMO7DNF2Z398 122 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 FAM189A2Q15884 450 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 OPN5Q6U736 354 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 LRRC18Q8N456 261 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 PLPP5Q8NEB5 264 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 REEP6Q96HR9 211 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 SH3BGRL3Q9H299 93 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 GSN-AS1Q9NRJ2 163 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 STARD10Q9Y365 291 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 IGHV1OR15-9A0A0B4J2B8 117 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 MBPP02686 304 aaPredicted RBP24.07■■□□□ 1.44
CBX4-201ENST00000269397 GAPDHP04406 335 aaKnown RBP24.07■■□□□ 1.44
CBX4-201ENST00000269397 NAT2P11245 290 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 ACKR3P25106 362 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 OR2B8PP59922 312 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 CHAF1BQ13112 559 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 SLC38A9Q8NBW4 561 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 SLC25A43Q8WUT9 341 aaPredicted RBP24.07■■□□□ 1.44
CBX4-201ENST00000269397 METTL7AQ9H8H3 244 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 TUBD1Q9UJT1 453 aa24.07■■□□□ 1.44
CBX4-201ENST00000269397 ZNF726A6NNF4 738 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 SERPINE3A8MV23 424 aa24.06■■□□□ 1.44
CBX4-201ENST00000269397 PRF1P14222 555 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms