RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 PTGER4P35408 488 aa17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 SSBP1Q04837 148 aaKnown RBP17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 GTF3C1Q12789 2109 aa17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 GABRA6Q16445 453 aa17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 CRIP3Q6Q6R5 217 aa17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 CD163Q86VB7 1156 aa17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 COMMD7Q86VX2 200 aa17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 CCDC36Q8IYA8 594 aa17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 PIGTQ969N2 578 aa17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 ZNF75AQ96N20 296 aa17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 SEC22CQ9BRL7 303 aa17.8■□□□□ 0.44
LYSMD2-201ENST00000267838 METTL21EPA6NDL7 271 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 FIGNL2A6NMB9 653 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 TMEM14DPA8MWL7 114 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 OR2A4O95047 310 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 COX5AP20674 150 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 ID4P47928 161 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 UBE2NP61088 152 aaKnown RBP17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 CLVS2Q5SYC1 327 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 C1orf185Q5T7R7 199 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 TMEM42Q69YG0 159 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 OR2W3Q7Z3T1 314 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 Q8NA96 180 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 FAM46BQ96A09 425 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 C1orf147Q96MC9 270 aaPredicted RBP17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 OR2A7Q96R45 310 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 KIF25Q9UIL4 384 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 PROCRQ9UNN8 238 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 FAM215AQ9Y5M1 114 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 LAMA5O15230 3695 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 SERPINA5P05154 406 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 UBBP0CG47 229 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 OPCMLQ14982 345 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 CNN3Q15417 329 aaKnown RBP17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 RFPL4BQ6ZWI9 263 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 LRRC20Q8TCA0 184 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 SPSB1Q96BD6 273 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 STARD4Q96DR4 205 aa17.79■□□□□ 0.44
LYSMD2-201ENST00000267838 CACNA1GO43497 2377 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 TOXO94900 526 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 CGAP01215 116 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 PLA2G5P39877 138 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 PTGFRP43088 359 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 MALLQ13021 153 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 PCGF3Q3KNV8 242 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 MOGAT2Q3SYC2 334 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 RAB12Q6IQ22 244 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 IDO2Q6ZQW0 420 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 GABRG1Q8N1C3 465 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 ACBD4Q8NC06 268 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 SLC30A7Q8NEW0 376 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 FAM57AQ8TBR7 257 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 ASB13Q8WXK3 278 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 REPIN1Q9BWE0 567 aaKnown RBP17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 GSX2Q9BZM3 304 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 CHIAQ9BZP6 476 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 PIPOXQ9P0Z9 390 aa17.78■□□□□ 0.44
LYSMD2-201ENST00000267838 ZNF816-ZNF321PA0A0X1KG74 233 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 PLSCR5A0PG75 271 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 L7N2F9 121 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 NRASP01111 189 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 CRHP06850 196 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 HOXB1P14653 301 aaPredicted RBP17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 ANXA7P20073 488 aaKnown RBP17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 PRKACBP22694 351 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 PRSS3P35030 304 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 CXADRP78310 365 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 GK2Q14410 553 aaPredicted RBP17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 CISD2Q8N5K1 135 aaKnown RBP17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 C1orf162Q8NEQ5 155 aaPredicted RBP17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 OR5D18Q8NGL1 313 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 KCNG3Q8TAE7 436 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 BOD1Q96IK1 185 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 GHRLQ9UBU3 117 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 STARD10Q9Y365 291 aa17.77■□□□□ 0.44
LYSMD2-201ENST00000267838 A0A1W2PR80 420 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 B8ZZF3 427 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 RGS11O94810 467 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 NGFP01138 241 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 AKAIN1P0CW23 69 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 RRASP10301 218 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 NAT2P11245 290 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 ZNF14P17017 642 aaPredicted RBP17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 ALDH3B1P43353 468 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 TDGF1P3P51864 188 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 TSC22D1Q15714 1073 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 EIF2S3LQ2VIR3 472 aaKnown RBP17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 ZNF610Q8N9Z0 462 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 TNFAIP8L1Q8WVP5 186 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 OPN3Q9H1Y3 402 aaPredicted RBP17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 KCNN3Q9UGI6 736 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 I3L521 148 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 RAB27BO00194 218 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 CDC14BO60729 498 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 SCGNO76038 276 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 IL2RAP01589 272 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 WNT5AP41221 380 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 MTCP1P56278 107 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 GUCA2AQ02747 115 aa17.76■□□□□ 0.43
LYSMD2-201ENST00000267838 TBC1D28Q2M2D7 210 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms