RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 COL24A1Q17RW2 1714 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PMS2P1A4D2B8 440 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 TRDCB7Z8K6 153 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 GLSO94925 669 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 PSMB5P28074 263 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 CST5P28325 142 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 SLC6A11P48066 632 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PLXDC2Q6UX71 529 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 RNF175Q8N4F7 328 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 ZFP62Q8NB50 900 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 OR4A16Q8NH70 328 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 SLC25A43Q8WUT9 341 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 LCORQ96JN0 433 aaPredicted RBP5.16□□□□□ -1.58
VCAN-201ENST00000265077 RAB33BQ9H082 229 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 AMDHD2Q9Y303 409 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 PLXNB3Q9ULL4 1909 aa5.16□□□□□ -1.58
VCAN-201ENST00000265077 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 ANKRD20A5PA0PJZ0 165 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 SLC25A17O43808 307 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 AMTP48728 403 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 TMEM267Q0VDI3 215 aaPredicted RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 DHRS13Q6UX07 377 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 DMBX1Q8NFW5 382 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 RPUSD4Q96CM3 377 aaKnown RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 CHST11Q9NPF2 352 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 MARCH5Q9NX47 278 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 VDAC3Q9Y277 283 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 PIGLQ9Y2B2 252 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 SLC17A3O00476 420 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 PMCHP20382 165 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 CLDN2P57739 230 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 ZP2Q05996 745 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 CAMKMTQ7Z624 323 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 BCL2L10Q9HD36 194 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 Q9N2K0 584 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 HINT3Q9NQE9 182 aaKnown RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 C19orf53Q9UNZ5 99 aaPredicted RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 LINC01387J3KSC0 135 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 HPXP02790 462 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 SNRPNP63162 240 aaKnown RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 ZNF85Q03923 595 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 AGBL4Q5VU57 503 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 SLC16A11Q8NCK7 471 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 OR4F5Q8NH21 305 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 OR4F4Q96R69 305 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 RNF2Q99496 336 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 OSGIN2Q9Y236 505 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 HCRTR1O43613 425 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 GPANK1O95872 356 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 RPL27P61353 136 aaKnown RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 ZNF787Q6DD87 383 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 MRPL52Q86TS9 123 aaKnown RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 TMEM183AQ8IXX5 376 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 ARHGEF39Q8N4T4 335 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 OR5AU1Q8NGC0 362 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 MRPL38Q96DV4 380 aaKnown RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 TEAD3Q99594 435 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 K7EQM0 130 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 MOSPD3O75425 235 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 OR5H8P0DN80 308 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 NPPBP16860 134 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 VASPP50552 380 aaPredicted RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 CDK5R1Q15078 307 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 DEFB119Q8N690 84 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 GSX1Q9H4S2 264 aaPredicted RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 PDFQ9HBH1 243 aa5.15□□□□□ -1.58
VCAN-201ENST00000265077 YTHDF2Q9Y5A9 579 aaKnown RBP5.15□□□□□ -1.58
VCAN-201ENST00000265077 HMGN4O00479 90 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 SEMA7AO75326 666 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 PRSS23O95084 383 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 TRGC2P03986 189 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 APOBEC1P41238 236 aaKnown RBP5.15□□□□□ -1.59
VCAN-201ENST00000265077 AGFG1P52594 562 aaKnown RBP5.15□□□□□ -1.59
VCAN-201ENST00000265077 PNLIPRP3Q17RR3 467 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 OR2T10Q8NGZ9 312 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 PFN4Q8NHR9 129 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 GPA33Q99795 319 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 OBP2BQ9NPH6 170 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 TCFL5Q9UL49 500 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 LOC107986453A0A1B0GWG9 222 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 TARM1B6A8C7 271 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 GSTZ1O43708 216 aaPredicted RBP5.15□□□□□ -1.59
VCAN-201ENST00000265077 EDIL3O43854 480 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 IGHV2-70P01814 119 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 FCGR2AP12318 317 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 ACKR3P25106 362 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 RAC1P63000 192 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 HLA-DRB3P79483 266 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 ELOBQ15370 118 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 ISXQ2M1V0 245 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 HLA-BQ31612 363 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 C1orf140Q5VVS0 124 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 TMEM208Q9BTX3 173 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 ZMAT3Q9HA38 289 aaKnown RBP5.15□□□□□ -1.59
VCAN-201ENST00000265077 GNG12Q9UBI6 72 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 DHRS7CA6NNS2 312 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 DIRC3C9JPN6 131 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 H0Y8G0 127 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 CDS2O95674 445 aa5.15□□□□□ -1.59
VCAN-201ENST00000265077 CEBPBP17676 345 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms