RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 MAB21L1Q13394 359 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 MPPED2Q15777 294 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 PRAMEF6Q5VXH4 476 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 NKAIN3Q8N8D7 197 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 OR5A2Q8NGI9 324 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 OR13G1Q8NGZ3 307 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 ZNF671Q8TAW3 534 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 LGALS14Q8TCE9 139 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 TNFAIP8L1Q8WVP5 186 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 SPSB1Q96BD6 273 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 FAM3DQ96BQ1 224 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 SORCS2Q96PQ0 1159 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 GAL3ST1Q99999 423 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 DHRS9Q9BPW9 319 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 MIXL1Q9H2W2 232 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 NEK6Q9HC98 313 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 SMURF1Q9HCE7 757 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 UFSP2Q9NUQ7 469 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 OR5V1Q9UGF6 321 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 ING4Q9UNL4 249 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 MRPS28Q9Y2Q9 187 aaKnown RBP8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 IGKV1-12A0A0C4DH73 117 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 A0A1W2PP11 408 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 PLSCR5A0PG75 271 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 RGS5O15539 181 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 SYNGR1O43759 233 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 HPGDSO60760 199 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 RHBDL1O75783 438 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 CLPXO76031 633 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 IGKV1D-12P01611 117 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 IGHV1-46P01743 117 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 TMEM225BP0DP42 221 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 PTGFRP43088 359 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 HAAOP46952 286 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 ZNF81P51508 661 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 EFNB2P52799 333 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 ZP1P60852 638 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 C2orf76Q3KRA6 126 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 AWAT2Q6E213 333 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 HAGHLQ6PII5 290 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 GLIPR1L1Q6UWM5 242 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 ZNF826PQ6ZT77 177 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 LHFPL2Q6ZUX7 228 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 BIVMQ86UB2 503 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 LAX1Q8IWV1 398 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 OR6M1Q8NGM8 313 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 TBC1D15Q8TC07 691 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 FAM46BQ96A09 425 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 FOXRED1Q96CU9 486 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 ELMOD3Q96FG2 381 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 C1orf147Q96MC9 270 aaPredicted RBP8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 ZNF488Q96MN9 340 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 MICU1Q9BPX6 476 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 RTL8AQ9BWD3 113 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 UBTD1Q9HAC8 227 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 ABCB9Q9NP78 766 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 TREM2Q9NZC2 230 aa8.27□□□□□ -1.09
SNRNP40-201ENST00000263694 DSCAMO60469 2012 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 A0A075B6Q4 140 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 TMEM272A0A1B0GTI8 110 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 A0A1B0GWJ7 208 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 VSTM5A8MXK1 200 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 F8VVB4 439 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 F8VWA3 439 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 HS3ST1O14792 307 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 CD8AP01732 235 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 EIF4EP06730 217 aaKnown RBP8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 SOD3P08294 240 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 ARSBP15848 533 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 FASNP49327 2511 aaKnown RBP8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 GMFBP60983 142 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 GNG3P63215 75 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 CENPEQ02224 2701 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 ZNF154Q13106 437 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 PDZK1IP1Q13113 114 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 SWI5Q1ZZU3 235 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 HIST2H2BCQ6DN03 193 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 SLC25A26Q70HW3 274 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 TGIF2LYQ8IUE0 185 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 CROCCP3Q8IVE0 287 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 C11orf53Q8IXP5 236 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 MUC15Q8N387 334 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 ZNF611Q8N823 705 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 SAMD12Q8N8I0 201 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 SCCPDHQ8NBX0 429 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 OR6Q1Q8NGQ2 317 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 ITLN1Q8WWA0 313 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 ITFG2Q969R8 447 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 FBXW5Q969U6 566 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 SLAMF9Q96A28 289 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 CYYR1Q96J86 154 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 TECTBQ96PL2 329 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 UQCC2Q9BRT2 126 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 CXXC4Q9H2H0 198 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 MMP27Q9H306 513 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 OR51I2Q9H344 312 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 BANF2Q9H503 90 aa8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 ELL3Q9HB65 397 aaPredicted RBP8.26□□□□□ -1.09
SNRNP40-201ENST00000263694 DYSFO75923 2080 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms