RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 CCDC187A0A096LP49 1063 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 A0A1W2PPC4 97 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 PRAMEF25A6NGN4 478 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 TMEM150CB9EJG8 249 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 OR6A2O95222 327 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 CD27P26842 260 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 TACR3P29371 465 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 CRMP1Q14194 572 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 TMEM164Q5U3C3 297 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 KIRREL2Q6UWL6 708 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 COMMD6Q7Z4G1 85 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 MDGA2Q7Z553 956 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 SELENOHQ8IZQ5 122 aaKnown RBP7.49□□□□□ -1.21
LDB3-201ENST00000263066 MFSD9Q8NBP5 474 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 LFNGQ8NES3 379 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 DEFB124Q8NES8 71 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 FNDC9Q8TBE3 224 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 IFI44Q8TCB0 444 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 ZNF480Q8WV37 535 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 TMEM106AQ96A25 262 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 PRRC1Q96M27 445 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 TEAD3Q99594 435 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 EGLN1Q9GZT9 426 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 LYRM2Q9NU23 88 aaPredicted RBP7.49□□□□□ -1.21
LDB3-201ENST00000263066 FBXL17Q9UF56 701 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 LIPGQ9Y5X9 500 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 MED13LQ71F56 2210 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 TAAR5O14804 337 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 VAMP5O95183 116 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 FBLP22087 321 aaKnown RBP7.49□□□□□ -1.21
LDB3-201ENST00000263066 OTX2P32243 289 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 GABRA4P48169 554 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 FGF8P55075 233 aaPredicted RBP7.49□□□□□ -1.21
LDB3-201ENST00000263066 PPP1CAP62136 330 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 MRPS34P82930 218 aaKnown RBP7.49□□□□□ -1.21
LDB3-201ENST00000263066 PWWP2BQ6NUJ5 590 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 SLC36A1Q7Z2H8 476 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 WFDC8Q8IUA0 241 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 ZNF101Q8IZC7 436 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 GATSQ8NAP1 163 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 OR2G3Q8NGZ4 309 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 ADAMTS15Q8TE58 950 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 CMBLQ96DG6 245 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 SEH1LQ96EE3 360 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 ALKBH3Q96Q83 286 aaPredicted RBP7.49□□□□□ -1.21
LDB3-201ENST00000263066 ZNF587Q96SQ5 575 aaPredicted RBP7.49□□□□□ -1.21
LDB3-201ENST00000263066 RARRES2Q99969 163 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 TMEM74BQ9NUR3 256 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 SERTAD3Q9UJW9 196 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 TCFL5Q9UL49 500 aa7.49□□□□□ -1.21
LDB3-201ENST00000263066 TRAV1-2A0A0B4J238 106 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 IGHV1OR15-9A0A0B4J2B8 117 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 NTN1O95631 604 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 OPN1LWP04000 364 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 TAS2R38P59533 333 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 ZXDAP98168 799 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 NAAAQ02083 359 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 OPN5Q6U736 354 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 OR51F2Q8NH61 342 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 MARCH1Q8TCQ1 289 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 MRGPRDQ8TDS7 321 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 ASIC5Q9NY37 505 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 RNF150Q9ULK6 438 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 SPAARA0A1B0GVQ0 90 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 ARRDC5A6NEK1 342 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 MSGN1A6NI15 193 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 PLPP2O43688 288 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 KLK8O60259 260 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 CLEC3BP05452 202 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 STAG3L3P0CL85 134 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 ELLP55199 621 aaPredicted RBP7.48□□□□□ -1.21
LDB3-201ENST00000263066 RPL24P83731 157 aaKnown RBP7.48□□□□□ -1.21
LDB3-201ENST00000263066 FOXC1Q12948 553 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 TPTE2P1Q5T6R2 138 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 AADACL3Q5VUY0 350 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 RPL22L1Q6P5R6 122 aaKnown RBP7.48□□□□□ -1.21
LDB3-201ENST00000263066 UNQ5815/PRO19632Q6UWF5 114 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 SGPP2Q8IWX5 399 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 STT3BQ8TCJ2 826 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 RASD2Q96D21 266 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 GPA33Q99795 319 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 KCNK15Q9H427 330 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 CLDN16Q9Y5I7 305 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 HS3ST3B1Q9Y662 390 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 TRAV27A0A087WT01 109 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 TMEM269A0A1B0GVZ9 245 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 CDC14CA4D256 554 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 ZNF878C9JN71 531 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 DUX1O43812 170 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 GDF9O60383 454 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 CD33P20138 364 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 GABRR1P24046 479 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 BRS3P32247 399 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 HLA-DRB3P79483 266 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 TIAL1Q01085 375 aaKnown RBP eCLIP7.48□□□□□ -1.21
LDB3-201ENST00000263066 FBLN7Q53RD9 439 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 ZNF385BQ569K4 471 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 FIGLAQ6QHK4 219 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 TRAPPC6BQ86SZ2 158 aa7.48□□□□□ -1.21
LDB3-201ENST00000263066 C1QL4Q86Z23 238 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms