RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 C7orf77A4D0Y5 90 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 IFITM10A6NMD0 228 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 GJE1A6NN92 205 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 C11orf98E9PRG8 122 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 K7EM74 188 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 OGG1O15527 345 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 CD1AP06126 327 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 PYCR1P32322 319 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 PRKXP51817 358 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 GAMTQ14353 236 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 HNF4GQ14541 408 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 SURF2Q15527 256 aaPredicted RBP16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR8G1Q15617 311 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 TMPPEQ6ZT21 453 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 EXTL1Q92935 676 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 SMIM8Q96KF7 97 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 MICU1Q9BPX6 476 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 POFUT1Q9H488 388 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 CHST11Q9NPF2 352 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 CMC2Q9NRP2 79 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 ST6GALNAC2Q9UJ37 374 aa16.63■□□□□ 0.25
COL4A3BP-201ENST00000261415 SPENQ96T58 3664 aaKnown RBP16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 FBXO24O75426 580 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR6A2O95222 327 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 ITGB2P05107 769 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 SRMP19623 302 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 DVL1P1P54792 670 aaPredicted RBP16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 CTXN1P60606 82 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 RNASE10Q5GAN6 216 aaKnown RBP16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 H1FNTQ75WM6 255 aaPredicted RBP16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 GGNQ86UU5 652 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 BEND2Q8NDZ0 799 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR51S1Q8NGJ8 323 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR10D4PQ8NGN7 298 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 SMIM19Q96E16 107 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 A0A0J9YW62 118 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 TEX13DA0A0J9YY54 714 aaPredicted RBP16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 FAM183AA6NL82 134 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 ARPC3O15145 178 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 HKR1P10072 659 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 OR12D2P58182 307 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 LSM6P62312 80 aaKnown RBP16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 ACTC1P68032 377 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 ACTA1P68133 377 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 CLINT1Q14677 625 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 LIPNQ5VXI9 398 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 DHRS11Q6UWP2 260 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 RPTNQ6XPR3 784 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 ETV3LQ6ZN32 361 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 ZCCHC14Q8WYQ9 949 aaKnown RBP16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 ABHD17AQ96GS6 310 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 KIRREL1Q96J84 757 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 SLC25A21Q9BQT8 299 aaPredicted RBP16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 B3GALT5Q9Y2C3 310 aa16.62■□□□□ 0.25
COL4A3BP-201ENST00000261415 MS4A18H0YCH9 400 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 TNFSF11O14788 317 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 MAGEB4O15481 346 aaPredicted RBP16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 ZZEF1O43149 2961 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 HLA-GP17693 338 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 BPIFB3P59826 476 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 SLC35A1P78382 337 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 TNFRSF9Q07011 255 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 COTL1Q14019 142 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 SLC10A1Q14973 349 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 ATXN7L3Q14CW9 347 aaPredicted RBP16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 MS4A18Q3C1V0 323 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 LRRC37A5PQ49AS3 106 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 AWAT1Q58HT5 328 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 Q6ZS92 163 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 CCDC54Q8NEL0 328 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 TMED6Q8WW62 240 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 NOL4LQ96MY1 436 aaPredicted RBP16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 CHST6Q9GZX3 395 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 ZDHHC11Q9H8X9 412 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 MED6O75586 246 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 SNRNP70P08621 437 aaKnown RBP16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 NR2C1P13056 603 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 HIST1H1CP16403 213 aaKnown RBP16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 CD34P28906 385 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 UNQ9370/PRO34162Q6UXP9 181 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 HIST2H3AQ71DI3 136 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 KDM8Q8N371 416 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 FAM24BQ8N5W8 94 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 RBMXL3Q8N7X1 1067 aaKnown RBP16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 PNLDC1Q8NA58 520 aaKnown RBP16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 MAFIPQ8WZ33 124 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 ISOC2Q96AB3 205 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 RASD2Q96D21 266 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 Q96M85 177 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 LIPGQ9Y5X9 500 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 V9GY05 133 aa16.61■□□□□ 0.25
COL4A3BP-201ENST00000261415 PIEZO2Q9H5I5 2752 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 RIIAD1A6NNX1 92 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 EIF1AYO14602 144 aaKnown RBP16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 PLGP00747 810 aaPredicted RBP16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 PTHLHP12272 177 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 AKR1C3P42330 323 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 ATP1B3P54709 279 aa16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 SSBP1Q04837 148 aaKnown RBP16.6■□□□□ 0.25
COL4A3BP-201ENST00000261415 ZP4Q12836 540 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms