RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 ELAVL3Q14576 367 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 TMEM97Q5BJF2 176 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 C2orf50Q96LR7 162 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 SLC25A18Q9H1K4 315 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 AUNIPQ9H7T9 357 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 SLC45A2Q9UMX9 530 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 B5MCH6 92 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 CCL16O15467 120 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 CTSEP14091 401 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 DUSP3P51452 185 aaPredicted RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 CRISP3P54108 245 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 MED25Q71SY5 747 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 GKN2Q86XP6 184 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 OR2K2Q8NGT1 345 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF764Q96H86 408 aaPredicted RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 NSG2Q9Y328 171 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 SMAD7O15105 426 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 SRMP19623 302 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 MC4RP32245 332 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 CYB561P49447 251 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 GNG3P63215 75 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 SSBP1Q04837 148 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 MEPCEQ7L2J0 689 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 FER1L6-AS1Q8NA97 138 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 OR2M7Q8NG81 312 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 FAM222BQ8WU58 562 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 TRIB3Q96RU7 358 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 RTN4RQ9BZR6 473 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 WDR61Q9GZS3 305 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 WDR13Q9H1Z4 485 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 THYN1Q9P016 225 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 CHST2Q9Y4C5 530 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 MEGF11A6BM72 1044 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF253O75346 499 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 CST5P28325 142 aaPredicted RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 EMC4Q5J8M3 183 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 RTN4RL1Q86UN2 441 aaPredicted RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 OOSP2Q86WS3 158 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 TEX26Q8N6G2 289 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 NHLRC2Q8NBF2 726 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 OR51A4Q8NGJ6 313 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 OR10X1Q8NGY0 326 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 THEM6Q8WUY1 208 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 IGSF21Q96ID5 467 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 MFSD1Q9H3U5 465 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 PTRH2Q9Y3E5 179 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 MYH4Q9Y623 1939 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 TLCD2A6NGC4 264 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 FFAR2O15552 330 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 SLC35E2BP0CK96 405 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 GLIPR1P48060 266 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 FABP5Q01469 135 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 PAFAH1B3Q15102 231 aaKnown RBP6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 SYPL2Q5VXT5 272 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 MS4A6EQ96DS6 147 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 CHRNA10Q9GZZ6 450 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 HHLA2Q9UM44 414 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 YIPF1Q9Y548 306 aa6.07□□□□□ -1.44
PDGFRA-201ENST00000257290 LRRC37AA6NMS7 1700 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 MYADML2A6NDP7 307 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GAGE12JA6NER3 117 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF195O14628 629 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 FRS3O43559 492 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GDF9O60383 454 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GAGE7O76087 117 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GAGE12FP0CL80 117 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GAGE12GP0CL81 117 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GAGE12IP0CL82 117 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 LAMP2P13473 410 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 WNT3P56703 355 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 RAC3P60763 192 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GAGE4Q13068 117 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF506Q5JVG8 444 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 OLIG3Q7RTU3 272 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 OR10AG1Q8NH19 301 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GNRHR2Q96P88 292 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 IP6K3Q96PC2 410 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 CACFD1Q9UGQ2 172 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 ZNF337Q9Y3M9 751 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 PHIPQ8WWQ0 1821 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 TUBGCP6Q96RT7 1819 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 A0A1B0GWB2 263 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 OR4C46A6NHA9 309 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 IGHV2-5P01817 119 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GZMBP10144 247 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 CR2P20023 1033 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 GDF1P27539 372 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 MRPL54Q6P161 138 aaKnown RBP6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 RGP1Q92546 391 aaPredicted RBP6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 MSI2Q96DH6 328 aaKnown RBP6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 MRGPRX2Q96LB1 330 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 PPP1R3EQ9H7J1 279 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 A4GALTQ9NPC4 353 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 A0A1W2PPC1 479 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 NKX2-6A6NCS4 301 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 C19orf67A6NJJ6 358 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 TSPAN2O60636 221 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 SYNGR4O95473 234 aa6.06□□□□□ -1.44
PDGFRA-201ENST00000257290 CXCR3P49682 368 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms