RNA–Protein interactions for RNA: ENST00000254630.11

PTCD3-201, Transcript of pentatricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD3, Length 6,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-201ENST00000254630 MRGPREQ86SM8 312 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 RPEQ96AT9 228 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 AKR1E2Q96JD6 320 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 UQCC2Q9BRT2 126 aa7.78□□□□□ -1.16
PTCD3-201ENST00000254630 PLEKHB1Q9UF11 243 aaPredicted RBP7.78□□□□□ -1.16
PTCD3-201ENST00000254630 GOSR1O95249 250 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 PLAC9Q5JTB6 97 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 TIGD3Q6B0B8 471 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 OR8U1Q8NH10 309 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 TVP23CQ96ET8 276 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 MRPL22Q9NWU5 206 aaKnown RBP7.77□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF230Q9UIE0 474 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-201ENST00000254630 NGFP01138 241 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 FUCA1P04066 466 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 FUT3P21217 361 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 PCBP3P57721 371 aaKnown RBP7.77□□□□□ -1.17
PTCD3-201ENST00000254630 NUFIP2Q7Z417 695 aaKnown RBP7.77□□□□□ -1.17
PTCD3-201ENST00000254630 DERL3Q96Q80 235 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 DHRS9Q9BPW9 319 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 SLC17A5Q9NRA2 495 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 RNF24Q9Y225 148 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 SLC17A2O00624 439 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 BCL2L11O43521 198 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 MLF1P58340 268 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 PDCD1Q15116 288 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 OR5AP2Q8NGF4 316 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF385DQ9H6B1 395 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 COL11A1P12107 1806 aaPredicted RBP7.77□□□□□ -1.17
PTCD3-201ENST00000254630 SMIM17P0DL12 118 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF32P17041 273 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 NHLRC1Q6VVB1 395 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 SLC24A4Q8NFF2 622 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 OR13G1Q8NGZ3 307 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 LRRC3CA6NJW4 275 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 RER1O15258 196 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 FGF2P09038 288 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 SIGLEC14Q08ET2 396 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 C3AR1Q16581 482 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 Q6ZNX1 250 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 OR6S1Q8NH40 331 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 HMGCLL1Q8TB92 370 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 CCL17Q92583 94 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 FAM122AQ96E09 287 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 ADGRG7Q96K78 797 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 TMEM56Q96MV1 263 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 TCFL5Q9UL49 500 aa7.77□□□□□ -1.17
PTCD3-201ENST00000254630 LSM2Q9Y333 95 aaKnown RBP7.77□□□□□ -1.17
PTCD3-201ENST00000254630 EPPINO95925 133 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 ONECUT2O95948 504 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 CD3EP07766 207 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 SPNP16150 400 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 CALCRP30988 508 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 KISS1Q15726 138 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF239Q16600 458 aaKnown RBP7.76□□□□□ -1.17
PTCD3-201ENST00000254630 NKG7Q16617 165 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 PXDC1Q5TGL8 231 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 ETFRF1Q6IPR1 90 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 ARPC4-TTLL3A0A0A6YYG9 625 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 GABRA1P14867 456 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 MAGEA5P43359 124 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 FAM109BQ6ICB4 259 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-201ENST00000254630 RHBDD2Q6NTF9 364 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 OR8B3Q8NGG8 313 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 OR10Z1Q8NGY1 313 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 RTN4IP1Q8WWV3 396 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-201ENST00000254630 OR8B2Q96RD0 313 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 ZNF416Q9BWM5 594 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 TMEM231Q9H6L2 316 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 MIA3Q5JRA6 1907 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 C21orf140B9A014 251 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 ADAM10O14672 748 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 OPRK1P41145 380 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 CNN1P51911 297 aaKnown RBP7.76□□□□□ -1.17
PTCD3-201ENST00000254630 TMEM65Q6PI78 240 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 C16orf47Q6ZP98 133 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-201ENST00000254630 RPUSD4Q96CM3 377 aaKnown RBP7.76□□□□□ -1.17
PTCD3-201ENST00000254630 TMPRSS13Q9BYE2 586 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 UCK1Q9HA47 277 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 BOLA1Q9Y3E2 137 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 H3BMH7 237 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 LINC00299Q6ZSB3 139 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 C20orf196Q8IYI0 205 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 PRR7Q8TB68 274 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 OIT3Q8WWZ8 545 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 ARHGAP5-AS1Q96IT6 56 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 CHRDL1Q9BU40 450 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 DUSP15Q9H1R2 295 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-201ENST00000254630 TAF1LQ8IZX4 1826 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 A0A1W2PQD3 144 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 FCGR3BO75015 233 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 AGFG2O95081 481 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 ACTL6AO96019 429 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 CLPPQ16740 277 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-201ENST00000254630 B3GNTL1Q67FW5 361 aaPredicted RBP7.76□□□□□ -1.17
PTCD3-201ENST00000254630 FAM122BQ7Z309 247 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 RHNO1Q9BSD3 238 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 GOLT1BQ9Y3E0 138 aa7.76□□□□□ -1.17
PTCD3-201ENST00000254630 LRRC37AA6NMS7 1700 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 ADAM20O43506 726 aa7.75□□□□□ -1.17
PTCD3-201ENST00000254630 SLC25A4P12235 298 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms