RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 OR10G3Q8NGC4 313 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 GPR132Q9UNW8 380 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 LOC400499M0QZD8 3231 aa10.56□□□□□ -0.72
USHBP1-201ENST00000252597 TLCD2A6NGC4 264 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 H3BP45 60 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 IGHG1P01857 330 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 CLEC12BQ2HXU8 276 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 RAET1LQ5VY80 246 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 GGNBP1Q5YKI7 109 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 RNASE11Q8TAA1 199 aaKnown RBP10.55□□□□□ -0.72
USHBP1-201ENST00000252597 SLC25A43Q8WUT9 341 aaPredicted RBP10.55□□□□□ -0.72
USHBP1-201ENST00000252597 SLC39A7Q92504 469 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 EDEM2Q9BV94 578 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 SEC11CQ9BY50 192 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 FAM206AQ9NX38 181 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 SLC2A8Q9NY64 477 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 CA14Q9ULX7 337 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 COLQQ9Y215 455 aaPredicted RBP10.55□□□□□ -0.72
USHBP1-201ENST00000252597 DHRS7CA6NNS2 312 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 PHF1O43189 567 aaPredicted RBP10.55□□□□□ -0.72
USHBP1-201ENST00000252597 OR2J2O76002 312 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 PTGER4P35408 488 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 SUPT4H1P63272 117 aaKnown RBP10.55□□□□□ -0.72
USHBP1-201ENST00000252597 RSU1Q15404 277 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 GUK1Q16774 197 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF674Q2M3X9 581 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 C1orf100Q5SVJ3 147 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 DNM1P46Q6ZS02 220 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 LYZL2Q7Z4W2 148 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 OR10S1Q8NGN2 331 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 OR1N1Q8NGS0 311 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 OR11L1Q8NGX0 322 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 RNF133Q8WVZ7 376 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 SCGB3A2Q96PL1 93 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 CST7O76096 145 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 CHRM2P08172 466 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 EPHA1P21709 976 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 FBXW12Q6X9E4 464 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 SLC30A7Q8NEW0 376 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 CNTNAP3Q9BZ76 1288 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 KCNIP3Q9Y2W7 256 aa10.55□□□□□ -0.72
USHBP1-201ENST00000252597 IGHV3-64DA0A0J9YX35 117 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF814B7Z6K7 855 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 LCATP04180 440 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 HPNP05981 417 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 FBP1P09467 338 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 OR5H8P0DN80 308 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 MDKP21741 143 aaPredicted RBP10.54□□□□□ -0.72
USHBP1-201ENST00000252597 CD38P28907 300 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 B2MP61769 119 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 S100PBPQ96BU1 408 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 PRRX2Q99811 253 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 RTBDNQ9BSG5 229 aaPredicted RBP10.54□□□□□ -0.72
USHBP1-201ENST00000252597 SLC26A1Q9H2B4 701 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF442Q9H7R0 627 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 PADI1Q9ULC6 663 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 LHFPL6Q9Y693 200 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 TSPAN2O60636 221 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 OR5AC1P0C628 307 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 FAM157CP0CG43 387 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 DRD1P21728 446 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 MMP16P51512 607 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 HSD11B2P80365 405 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 C17orf67Q0P5P2 114 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 HABP2Q14520 560 aaPredicted RBP10.54□□□□□ -0.72
USHBP1-201ENST00000252597 MST1LQ2TV78 715 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 ACTBL2Q562R1 376 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 Q7L0L9 218 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 DTWD2Q8NBA8 298 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 C1orf123Q9NWV4 160 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 COA4Q9NYJ1 87 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 HS3ST3A1Q9Y663 406 aa10.54□□□□□ -0.72
USHBP1-201ENST00000252597 IGKV3-11P04433 115 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 DHRS7BQ6IAN0 325 aaPredicted RBP10.53□□□□□ -0.72
USHBP1-201ENST00000252597 PFDN5Q99471 154 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 RARRES2Q99969 163 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 NMES1Q9C002 83 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 OR51B6Q9H340 312 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 MUC22E2RYF6 1773 aaPredicted RBP10.53□□□□□ -0.72
USHBP1-201ENST00000252597 A0A1W2PPC4 97 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 E9PLN8 166 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 LDLRAD4O15165 306 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 OR7C1O76099 320 aaPredicted RBP10.53□□□□□ -0.72
USHBP1-201ENST00000252597 IL2RAP01589 272 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 HKR1P10072 659 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 CD37P11049 281 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 DUSP1P28562 367 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 KIAA0141Q14154 515 aaPredicted RBP10.53□□□□□ -0.72
USHBP1-201ENST00000252597 RPUSD3Q6P087 351 aaKnown RBP10.53□□□□□ -0.72
USHBP1-201ENST00000252597 FDX2Q6P4F2 183 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 HIST1H2BAQ96A08 127 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 RAB18Q9NP72 206 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 BORCS7-ASMTA0A0B4J1R7 106 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 A0A1W2PR80 420 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 GDF9O60383 454 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 TMEM127O75204 238 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 ZNF708P17019 499 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 FSTP19883 344 aa10.53□□□□□ -0.72
USHBP1-201ENST00000252597 PPP1CCP36873 323 aaKnown RBP10.53□□□□□ -0.72
USHBP1-201ENST00000252597 OR5AS1Q8N127 324 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms