RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 ZSCAN4Q8NAM6 433 aaPredicted RBP18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 RRNAD1Q96FB5 475 aaKnown RBP18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 TSNAXQ99598 290 aaKnown RBP18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 EHFQ9NZC4 300 aa18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 TPT1P13693 172 aaKnown RBP18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 CPT2P23786 658 aa18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 MAML2Q8IZL2 1156 aaPredicted RBP18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 ROBO4Q8WZ75 1007 aa18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 ULBP2Q9BZM5 246 aa18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 NOSIPQ9Y314 301 aaKnown RBP18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 PCDHGA1Q9Y5H4 931 aa18.94■□□□□ 0.62
SH2D3A-201ENST00000245908 A0A0J9YW62 118 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 RAB19A4D1S5 217 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 G3V3Y1 287 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 SDCBPO00560 298 aaPredicted RBP18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 HTR3BO95264 441 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 RPS2P15880 293 aaKnown RBP18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 PVALBP20472 110 aaPredicted RBP18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 ZNF84P51523 738 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 PPA1Q15181 289 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 RTL6Q6ICC9 239 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 PRSS54Q6PEW0 395 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 LDLRAD3Q86YD5 345 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 SLC30A7Q8NEW0 376 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 SPTSSAQ969W0 71 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 S100A13Q99584 98 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 PLEK2Q9NYT0 353 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 PRR13Q9NZ81 148 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 PCDHB10Q9UN67 800 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 CCDC163A0A0D9SF12 145 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 C9J4A7 227 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 YKT6O15498 198 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 DBHP09172 617 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 RAC1P63000 192 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 SURF2Q15527 256 aaPredicted RBP18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 C20orf196Q8IYI0 205 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 PUSL1Q8N0Z8 303 aaKnown RBP18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 OR1S2Q8NGQ3 325 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 MAFIPQ8WZ33 124 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 EMG1Q92979 244 aaKnown RBP18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 PIGTQ969N2 578 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 JSRP1Q96MG2 331 aaPredicted RBP18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 CYTL1Q9NRR1 136 aa18.93■□□□□ 0.62
SH2D3A-201ENST00000245908 MRPS34P82930 218 aaKnown RBP18.92■□□□□ 0.62
SH2D3A-201ENST00000245908 IGSF11Q5DX21 431 aa18.92■□□□□ 0.62
SH2D3A-201ENST00000245908 DHRS7BQ6IAN0 325 aaPredicted RBP18.92■□□□□ 0.62
SH2D3A-201ENST00000245908 FBXO17Q96EF6 278 aa18.92■□□□□ 0.62
SH2D3A-201ENST00000245908 NECAB3Q96P71 396 aaPredicted RBP18.92■□□□□ 0.62
SH2D3A-201ENST00000245908 TMEM218A2RU14 115 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 TNFSF11O14788 317 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 GLRA1P23415 457 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 MLF1P58340 268 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 CHRFAM7AQ494W8 412 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 FAM27BQ5VT28 67 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 RPS19BP1Q86WX3 136 aaKnown RBP18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 BAP18Q8IXM2 172 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 TMEM156Q8N614 296 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 AGBL5Q8NDL9 886 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 DMBX1Q8NFW5 382 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 PIGQQ9BRB3 760 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 SRXN1Q9BYN0 137 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 FIGNL2A6NMB9 653 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 GPR31O00270 319 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 NTN3O00634 580 aaPredicted RBP18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 HOXA6P31267 233 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 TRA2AQ13595 282 aaKnown RBP eCLIP18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 OR2Y1Q8NGV0 311 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 C2orf50Q96LR7 162 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 TMEM100Q9NV29 134 aa18.91■□□□□ 0.62
SH2D3A-201ENST00000245908 CBR3O75828 277 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 CCL4P13236 92 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 CRYGSP22914 178 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 SNAI3Q3KNW1 292 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 TMEM88Q6PEY1 159 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 POC1AQ8NBT0 407 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 SGK3Q96BR1 496 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 ZNF837Q96EG3 531 aaPredicted RBP18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 OR10C1Q96KK4 312 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 SF3B5Q9BWJ5 86 aaKnown RBP18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 ELL3Q9HB65 397 aaPredicted RBP18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 ASF1BQ9NVP2 202 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 MYO7BQ6PIF6 2116 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 DNPH1O43598 174 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 Q96M66 194 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 AQP10Q96PS8 301 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 IER2Q9BTL4 223 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 METTL8Q9H825 291 aaKnown RBP18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 OR5AC2Q9NZP5 309 aa18.9■□□□□ 0.62
SH2D3A-201ENST00000245908 MSGN1A6NI15 193 aa18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 GJE1A6NN92 205 aa18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 DHRS7CA6NNS2 312 aa18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 RRP8O43159 456 aaKnown RBP18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 IL15RAQ13261 267 aa18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 RAB35Q15286 201 aa18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 PLEKHN1Q494U1 663 aaPredicted RBP18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 SPAG16Q8N0X2 631 aa18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 BHLHE23Q8NDY6 225 aa18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 GLYATL2Q8WU03 294 aa18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 MCTS1Q9ULC4 181 aaKnown RBP18.89■□□□□ 0.61
SH2D3A-201ENST00000245908 NSG1A0A0A6YYJ2 146 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms