RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 ARPC3O15145 178 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 MMP9P14780 707 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 RPL23AP62750 156 aaKnown RBP11.49□□□□□ -0.57
MSH2-201ENST00000233146 PRSS8Q16651 343 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 ARHGAP11BQ3KRB8 267 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 OCIAD2Q56VL3 154 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 CLEC18CQ8NCF0 446 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 ZNF738Q8NE65 137 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 OR56B2PQ8NGI1 322 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 OR10S1Q8NGN2 331 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 FNDC9Q8TBE3 224 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 OR10A5Q9H207 317 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 ELL3Q9HB65 397 aaPredicted RBP11.49□□□□□ -0.57
MSH2-201ENST00000233146 C1orf123Q9NWV4 160 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 CKLFQ9UBR5 152 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 DCDC2BA2VCK2 349 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 ANKUB1A6NFN9 424 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 ZNF43P17038 809 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 GLRA1P23415 457 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 PRLHRP49683 370 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 ZNF117Q03924 483 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 MORN2Q502X0 79 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 FBLN7Q53RD9 439 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 C1orf100Q5SVJ3 147 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 ZNF793Q6ZN11 406 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 DCAF4L2Q8NA75 395 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 ZFP62Q8NB50 900 aaPredicted RBP11.49□□□□□ -0.57
MSH2-201ENST00000233146 RHBDD1Q8TEB9 315 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 PTPMT1Q8WUK0 201 aaPredicted RBP11.49□□□□□ -0.57
MSH2-201ENST00000233146 MRGPRX1Q96LB2 322 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 IL17FQ96PD4 163 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 OR8B4Q96RC9 309 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 ZNF552Q9H707 407 aaPredicted RBP11.49□□□□□ -0.57
MSH2-201ENST00000233146 TMEM106BQ9NUM4 274 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 TAS2R4Q9NYW5 299 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 AK3Q9UIJ7 227 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 RFNGQ9Y644 331 aa11.49□□□□□ -0.57
MSH2-201ENST00000233146 A0A0B4J2E0 115 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 A0A1B0GX12 115 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 GJB5O95377 273 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 GNB3P16520 340 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 MRPL49Q13405 166 aaKnown RBP11.48□□□□□ -0.57
MSH2-201ENST00000233146 FDX2Q6P4F2 183 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 SPRED2Q7Z698 418 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 LHFPL1Q86WI0 220 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 C17orf78Q8N4C9 275 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 OR2G3Q8NGZ4 309 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 ZNF689Q96CS4 500 aaPredicted RBP11.48□□□□□ -0.57
MSH2-201ENST00000233146 RBMXL1Q96E39 390 aaKnown RBP11.48□□□□□ -0.57
MSH2-201ENST00000233146 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 ZNF700Q9H0M5 742 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 ABT1Q9ULW3 272 aaKnown RBP11.48□□□□□ -0.57
MSH2-201ENST00000233146 ANAPC10Q9UM13 185 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 FEZF1A0PJY2 475 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 ADM5C9JUS6 153 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 NID1P14543 1247 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 CSNK2A2P19784 350 aaPredicted RBP11.48□□□□□ -0.57
MSH2-201ENST00000233146 CDK3Q00526 305 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 GPR18Q14330 331 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 NUP54Q7Z3B4 507 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 C2orf73Q8N5S3 287 aaPredicted RBP11.48□□□□□ -0.57
MSH2-201ENST00000233146 OR51G1Q8NGK1 321 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 FAM46BQ96A09 425 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 TIFAQ96CG3 184 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 AIF1LQ9BQI0 150 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 TBL1XR1Q9BZK7 514 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 RHBDD3Q9Y3P4 386 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 IGHV2OR16-5A0A0B4J2B6 119 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 LOC102723971A0A1B0GUV8 181 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 STC2O76061 302 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 CTSBP07858 339 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 FSTP19883 344 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 CNN1P51911 297 aaKnown RBP11.48□□□□□ -0.57
MSH2-201ENST00000233146 ZNF658BQ4V348 819 aaPredicted RBP11.48□□□□□ -0.57
MSH2-201ENST00000233146 IL22RA1Q8N6P7 574 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 SCARF2Q96GP6 870 aaPredicted RBP11.48□□□□□ -0.57
MSH2-201ENST00000233146 TSSK2Q96PF2 358 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 SDF2Q99470 211 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 HIPK2Q9H2X6 1198 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 MRPL22Q9NWU5 206 aaKnown RBP11.48□□□□□ -0.57
MSH2-201ENST00000233146 B4GALT6Q9UBX8 382 aa11.48□□□□□ -0.57
MSH2-201ENST00000233146 HSPB2A8KAH6 182 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 MMP23AO75900 390 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 SYNGR4O95473 234 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 DBIP07108 87 aaKnown RBP11.47□□□□□ -0.57
MSH2-201ENST00000233146 PSMB5P28074 263 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 CDKN2AP42771 156 aaKnown RBP11.47□□□□□ -0.57
MSH2-201ENST00000233146 SSR2P43308 183 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 CCR5P51681 352 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 ZNF41P51814 821 aaPredicted RBP11.47□□□□□ -0.57
MSH2-201ENST00000233146 HSPB2Q16082 182 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 MPV17LQ2QL34 196 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 MFSD12Q6NUT3 480 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 LYPD6Q86Y78 171 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 OR4D6Q8NGJ1 314 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 OR2I1PQ8NGU4 316 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 WFDC5Q8TCV5 224 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 ASB5Q8WWX0 329 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 CST9LQ9H4G1 147 aa11.47□□□□□ -0.57
MSH2-201ENST00000233146 SLC2A9Q9NRM0 540 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms