RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 COX5BP10606 129 aa16.6■□□□□ 0.25
YBX3-201ENST00000228251 LIPCP11150 499 aa16.6■□□□□ 0.25
YBX3-201ENST00000228251 PPP3CBP16298 524 aa16.6■□□□□ 0.25
YBX3-201ENST00000228251 RNFT1Q5M7Z0 435 aa16.6■□□□□ 0.25
YBX3-201ENST00000228251 LHFPL2Q6ZUX7 228 aa16.6■□□□□ 0.25
YBX3-201ENST00000228251 CALHM2Q9HA72 323 aa16.6■□□□□ 0.25
YBX3-201ENST00000228251 GPR132Q9UNW8 380 aa16.6■□□□□ 0.25
YBX3-201ENST00000228251 L7N2F9 121 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 SS18L1O75177 396 aaPredicted RBP16.59■□□□□ 0.25
YBX3-201ENST00000228251 NRASP01111 189 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 IFNA6P05013 189 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 CD46P15529 392 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 CD34P28906 385 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 ARFRP1Q13795 201 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 RNPS1Q15287 305 aaKnown RBP16.59■□□□□ 0.25
YBX3-201ENST00000228251 MARCH1Q8TCQ1 289 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 CPNE2Q96FN4 548 aaPredicted RBP16.59■□□□□ 0.25
YBX3-201ENST00000228251 CLEC4MQ9H2X3 399 aaPredicted RBP16.59■□□□□ 0.25
YBX3-201ENST00000228251 IL36GQ9NZH8 169 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 OSGIN2Q9Y236 505 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 PTPRBP23467 1997 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 IGKV1-12A0A0C4DH73 117 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 ARGFXA6NJG6 315 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 RFPL4AA6NLU0 287 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 DBX1A6NMT0 343 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 RFPL4AL1F8VTS6 287 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 IFNA7P01567 189 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 IGKV1D-12P01611 117 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 C4BPBP20851 252 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 RBP2P50120 134 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 SLC10A1Q14973 349 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 C3AR1Q16581 482 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 RTL6Q6ICC9 239 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.59■□□□□ 0.25
YBX3-201ENST00000228251 TMEM185AQ8NFB2 350 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 OR13G1Q8NGZ3 307 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 TMEM230Q96A57 120 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 S100A13Q99584 98 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 METTL9Q9H1A3 318 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 ZNF552Q9H707 407 aaPredicted RBP16.59■□□□□ 0.25
YBX3-201ENST00000228251 ASCL3Q9NQ33 180 aa16.59■□□□□ 0.25
YBX3-201ENST00000228251 ANGPTL7O43827 346 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 DUS4LO95620 317 aaKnown RBP16.58■□□□□ 0.24
YBX3-201ENST00000228251 FTH1P19P0C7X4 201 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 TMEM225BP0DP42 221 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 CLLU1Q5K131 121 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 AADACL3Q5VUY0 350 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 NSUN5P2Q63ZY6 315 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 NUFIP2Q7Z417 695 aaKnown RBP16.58■□□□□ 0.24
YBX3-201ENST00000228251 DEFB124Q8NES8 71 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 PXT1Q8NFP0 134 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 WDYHV1Q96HA8 205 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 C5orf66Q9H5L9 145 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 ZDHHC11Q9H8X9 412 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 SPRR3Q9UBC9 169 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 KCNN3Q9UGI6 736 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 ZNF230Q9UIE0 474 aaPredicted RBP16.58■□□□□ 0.24
YBX3-201ENST00000228251 HSF4Q9ULV5 492 aa16.58■□□□□ 0.24
YBX3-201ENST00000228251 ZNF816-ZNF321PA0A0X1KG74 233 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 FAM230AA0A1W2PPH8 454 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 SPRY1O43609 319 aaPredicted RBP16.57■□□□□ 0.24
YBX3-201ENST00000228251 RPA2P15927 270 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 ZNF24P17028 368 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 AMY2BP19961 511 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 SNU13P55769 128 aaKnown RBP16.57■□□□□ 0.24
YBX3-201ENST00000228251 TAS2R31P59538 309 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 TAS2R46P59540 309 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 SORDQ00796 357 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 HLXQ14774 488 aaPredicted RBP16.57■□□□□ 0.24
YBX3-201ENST00000228251 C11orf88Q6PI97 169 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 C6orf201Q7Z4U5 140 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 OR5H2Q8NGV7 314 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 EMG1Q92979 244 aaKnown RBP16.57■□□□□ 0.24
YBX3-201ENST00000228251 APH1AQ96BI3 265 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 BORCS8Q96FH0 119 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 TECTBQ96PL2 329 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 PRRG4Q9BZD6 226 aa16.57■□□□□ 0.24
YBX3-201ENST00000228251 NOP16Q9Y3C1 178 aaKnown RBP16.57■□□□□ 0.24
YBX3-201ENST00000228251 LEUTXA8MZ59 168 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 ARPC5O15511 151 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 S100A11P31949 105 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 FUT6P51993 359 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 IL13RA1P78552 427 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 CAMK2BQ13554 666 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 TMEM65Q6PI78 240 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 TMUB2Q71RG4 321 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 OVCH2Q7RTZ1 564 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 REPIN1Q9BWE0 567 aaKnown RBP16.56■□□□□ 0.24
YBX3-201ENST00000228251 ELL3Q9HB65 397 aaPredicted RBP16.56■□□□□ 0.24
YBX3-201ENST00000228251 UBQLN2Q9UHD9 624 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 IGKV1D-8A0A087WSZ0 117 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 A0A096LPE4 126 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 A0A1W2PPZ6 126 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 RRP8O43159 456 aaKnown RBP16.56■□□□□ 0.24
YBX3-201ENST00000228251 HLA-HP01893 362 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 FPR2P25090 351 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 CHATP28329 748 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 DAZAP2Q15038 168 aaPredicted RBP16.56■□□□□ 0.24
YBX3-201ENST00000228251 ZNF766Q5HY98 468 aa16.56■□□□□ 0.24
YBX3-201ENST00000228251 NHLRC3Q5JS37 347 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms