RNA–Protein interactions for RNA: ENST00000226328.8

RUFY3-201, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene RUFY3, Length 4,233 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-201ENST00000226328 CCDC58Q4VC31 144 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 SFRP4Q6FHJ7 346 aaPredicted RBP4.53□□□□□ -1.68
RUFY3-201ENST00000226328 B3GLCTQ6Y288 498 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 NKAIN3Q8N8D7 197 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 CLRN3Q8NCR9 226 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 OR13D1Q8NGV5 346 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 RNASE11Q8TAA1 199 aaKnown RBP4.53□□□□□ -1.68
RUFY3-201ENST00000226328 FAM216AQ8WUB2 273 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 NRGNQ92686 78 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 TMEM186Q96B77 213 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 ZNF837Q96EG3 531 aaPredicted RBP4.53□□□□□ -1.68
RUFY3-201ENST00000226328 GON7Q9BXV9 100 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 TMEM138Q9NPI0 162 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 HIF1ANQ9NWT6 349 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 ING1Q9UK53 422 aaPredicted RBP4.53□□□□□ -1.68
RUFY3-201ENST00000226328 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.53□□□□□ -1.681e-6■■□□□ 14
RUFY3-201ENST00000226328 FREM3P0C091 2139 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 DLGAP1O14490 977 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 ACTL6BO94805 426 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 SOD3P08294 240 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 GTF2F2P13984 249 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 FAHP16930 419 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 GLP1RP43220 463 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 WNT4P56705 351 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 SPOCK1Q08629 439 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 PLGLAQ15195 96 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 NCR3LG1Q68D85 454 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 BRICD5Q6PL45 260 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 DCDC5Q6ZRR9 648 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 SLC25A26Q70HW3 274 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 REC114Q7Z4M0 266 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 OR10Z1Q8NGY1 313 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 TMEM158Q8WZ71 300 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 AP3S1Q92572 193 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 DUS3LQ96G46 650 aaKnown RBP4.53□□□□□ -1.68
RUFY3-201ENST00000226328 HS3ST6Q96QI5 342 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 GABARAPL3Q9BY60 117 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 STEAP1Q9UHE8 339 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 MGAT4AQ9UM21 535 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 CSPG4Q6UVK1 2322 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 A0A0U1RQV5 110 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 OOEPA6NGQ2 149 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 IQCF6A8MYZ5 107 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 FAM25AB3EWG3 89 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 FAM25CB3EWG5 89 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 FAM25GB3EWG6 89 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 SHISA9B4DS77 424 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 NGFP01138 241 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 ALPLP05186 524 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 MSMBP08118 114 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 ZNF250P15622 560 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 ZNF14P17017 642 aaPredicted RBP4.53□□□□□ -1.68
RUFY3-201ENST00000226328 KITLGP21583 273 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 CCKARP32238 428 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 TGFBR2P37173 567 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 PPP5CP53041 499 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 PRRX1P54821 245 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 PSG7Q13046 419 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 GK2Q14410 553 aaPredicted RBP4.53□□□□□ -1.68
RUFY3-201ENST00000226328 HES1Q14469 280 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 HLXQ14774 488 aaPredicted RBP4.53□□□□□ -1.68
RUFY3-201ENST00000226328 SPHARQ15513 63 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 PHYHD1Q5SRE7 291 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 PRAMEF6Q5VXH4 476 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 OTPQ5XKR4 325 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 ZNF627Q7L945 461 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 KLHDC3Q9BQ90 382 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 GHITMQ9H3K2 345 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 ZNF275Q9NSD4 429 aaPredicted RBP4.53□□□□□ -1.68
RUFY3-201ENST00000226328 RASL12Q9NYN1 266 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 HAO2Q9NYQ3 351 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 NPAP1Q9NZP6 1156 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 NLKQ9UBE8 527 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 TRAPPC2LQ9UL33 140 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 SLC22A13Q9Y226 551 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 WIPI2Q9Y4P8 454 aa4.53□□□□□ -1.68
RUFY3-201ENST00000226328 LOC100506127A0A0U1RQW1 187 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 CDIPTO14735 213 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 TCF21O43680 179 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 CRTAPO75718 401 aaPredicted RBP4.52□□□□□ -1.69
RUFY3-201ENST00000226328 ATF1P18846 271 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 S100A5P33763 92 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 MMP16P51512 607 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 GPR50Q13585 617 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 GALEQ14376 348 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 CR1LQ2VPA4 569 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 TMEM249Q2WGJ8 235 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 SLC22A6Q4U2R8 563 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 TMEM155Q4W5P6 130 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 GLYATL3Q5SZD4 288 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 C6orf183Q5T699 404 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 Q71RC1 249 aaPredicted RBP4.52□□□□□ -1.69
RUFY3-201ENST00000226328 FAM122BQ7Z309 247 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 PHYHIPQ92561 330 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 NTN4Q9HB63 628 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 ACOT13Q9NPJ3 140 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 OR6C3Q9NZP0 311 aa4.52□□□□□ -1.69
RUFY3-201ENST00000226328 CRNNQ9UBG3 495 aaPredicted RBP4.52□□□□□ -1.69
RUFY3-201ENST00000226328 SLC25A10Q9UBX3 287 aaPredicted RBP4.52□□□□□ -1.69
RUFY3-201ENST00000226328 LHFPL6Q9Y693 200 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms