RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 NPIPB4C9JG80 1138 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 TAAR5O14804 337 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 TRAF3IP2O43734 574 aaPredicted RBP10.87□□□□□ -0.67
NUP88-201ENST00000225696 DIRAS3O95661 229 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 PET100P0DJ07 73 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 FAHP16930 419 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 PRSS12P56730 875 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 C17orf67Q0P5P2 114 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 SMAD4Q13485 552 aaKnown RBP10.87□□□□□ -0.67
NUP88-201ENST00000225696 THEM4Q5T1C6 240 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 TSPO2Q5TGU0 170 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 C5orf46Q6UWT4 87 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 ZNF283Q8N7M2 679 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 NOXO1Q8NFA2 376 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 OR9K2Q8NGE7 335 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 EMG1Q92979 244 aaKnown RBP10.87□□□□□ -0.67
NUP88-201ENST00000225696 REEP6Q96HR9 211 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 PRRX2Q99811 253 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 NKX2-4Q9H2Z4 354 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 SPACA1Q9HBV2 294 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 ALKBH4Q9NXW9 302 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 GHRLQ9UBU3 117 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 TRBV23-1A0A0A0MS06 115 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 VSTM2BA6NLU5 285 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 XRCC2O43543 280 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 QDPRP09417 244 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 NME1P15531 152 aaKnown RBP10.87□□□□□ -0.67
NUP88-201ENST00000225696 GABRR1P24046 479 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 SNCAP37840 140 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 ASCL1P50553 236 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 OR2B8PP59922 312 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 ZNF616Q08AN1 781 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 IGSF11Q5DX21 431 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 FAM24BQ8N5W8 94 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 TMEM156Q8N614 296 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 EDARADDQ8WWZ3 215 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 PIGTQ969N2 578 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 ZDHHC12Q96GR4 267 aa10.87□□□□□ -0.67
NUP88-201ENST00000225696 URM1Q9BTM9 101 aaKnown RBP10.87□□□□□ -0.67
NUP88-201ENST00000225696 ELL3Q9HB65 397 aaPredicted RBP10.87□□□□□ -0.67
NUP88-201ENST00000225696 ZMAT5Q9UDW3 170 aaKnown RBP10.87□□□□□ -0.67
NUP88-201ENST00000225696 EXPH5Q8NEV8 1989 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 FRYQ5TBA9 3013 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 M0R036 132 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 MBPP02686 304 aaPredicted RBP10.86□□□□□ -0.67
NUP88-201ENST00000225696 OR8U8P0C7N1 319 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 NQO2P16083 231 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 CCL1P22362 96 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 RBMXP38159 391 aaKnown RBP10.86□□□□□ -0.67
NUP88-201ENST00000225696 ARL4DP49703 201 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 ZNF84P51523 738 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 TAS2R46P59540 309 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 POLR2GP62487 172 aaKnown RBP eCLIP10.86□□□□□ -0.67
NUP88-201ENST00000225696 EIF5AL1Q6IS14 154 aaKnown RBP10.86□□□□□ -0.67
NUP88-201ENST00000225696 BRICD5Q6PL45 260 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 C17orf82Q86X59 251 aaPredicted RBP10.86□□□□□ -0.67
NUP88-201ENST00000225696 UEVLDQ8IX04 471 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 SLC38A9Q8NBW4 561 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 OR6S1Q8NH40 331 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 FNDC9Q8TBE3 224 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 DYRK2Q92630 601 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 SCGB3A2Q96PL1 93 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 SPSB2Q99619 263 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 SEBOXQ9HB31 216 aaPredicted RBP10.86□□□□□ -0.67
NUP88-201ENST00000225696 C1orf123Q9NWV4 160 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 ZDHHC8Q9ULC8 765 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 A0A1W2PNV4 684 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 A0A1W2PPE2 198 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 F5H5K5 113 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 JTBO76095 146 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 TSPAN15O95858 294 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 S100A6P06703 90 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 NAT2P11245 290 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 FCGR2AP12318 317 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 PAX6P26367 422 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 SFTPDP35247 375 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 OPRM1P35372 400 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 NOVA1P51513 510 aaKnown RBP10.86□□□□□ -0.67
NUP88-201ENST00000225696 GUK1Q16774 197 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 RSPO1Q2MKA7 263 aaPredicted RBP10.86□□□□□ -0.67
NUP88-201ENST00000225696 SLC25A47Q6Q0C1 308 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 SULF2Q8IWU5 870 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 MVB12AQ96EY5 273 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 GNRHR2Q96P88 292 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 C8orf33Q9H7E9 229 aaPredicted RBP10.86□□□□□ -0.67
NUP88-201ENST00000225696 UCK1Q9HA47 277 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 TUBD1Q9UJT1 453 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 C14orf166Q9Y224 244 aaKnown RBP10.86□□□□□ -0.67
NUP88-201ENST00000225696 SDK2Q58EX2 2172 aa10.86□□□□□ -0.67
NUP88-201ENST00000225696 RHPN2P1A8MT19 583 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 TXNL1O43396 289 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 IGHG1P01857 330 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 MT-ND4LP03901 98 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 GAPDHP04406 335 aaKnown RBP10.85□□□□□ -0.67
NUP88-201ENST00000225696 DBHP09172 617 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 SMIM6P0DI80 62 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 ZNF239Q16600 458 aaKnown RBP10.85□□□□□ -0.67
NUP88-201ENST00000225696 PLPPR5Q32ZL2 321 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 C14orf28Q4W4Y0 310 aa10.85□□□□□ -0.67
NUP88-201ENST00000225696 ADAM5Q6NVV9 412 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms