RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 SRP14P37108 136 aaKnown RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 SPCS3P61009 180 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 TMEM97Q5BJF2 176 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 ZADH2Q8N4Q0 377 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 OR1L4Q8NGR5 311 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 OR8U1Q8NH10 309 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 OR6X1Q8NH79 312 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 COX14Q96I36 57 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 TMEM56Q96MV1 263 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 TRIB1Q96RU8 372 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 USB1Q9BQ65 265 aaKnown RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 MACROD1Q9BQ69 325 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 SF3B5Q9BWJ5 86 aaKnown RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 TNFRSF12AQ9NP84 129 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PISDQ9UG56 409 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 DSPPQ9NZW4 1301 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 CDC14BO60729 498 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 ANKRD34CP0C6C1 535 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 NME1P15531 152 aaKnown RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 ABOP16442 354 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 DEFB103AP81534 67 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 MAT1AQ00266 395 aaKnown RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 TESK1Q15569 626 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 SLC25A35Q3KQZ1 300 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PLAC9Q5JTB6 97 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PAQR6Q6TCH4 344 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 DEFB119Q8N690 84 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 ZNRF4Q8WWF5 429 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 AKR1E2Q96JD6 320 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 NOL4LQ96MY1 436 aaPredicted RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 SIGLEC11Q96RL6 698 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PLA2G12AQ9BZM1 189 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 COMMD5Q9GZQ3 224 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 TRAPPC1Q9Y5R8 145 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PI4KAP42356 2102 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 IDSB3KWA1 339 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 K7ESM1 405 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 CTSVO60911 334 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PGA4P0DJD7 388 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 PGA5P0DJD9 388 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 SLC2A1P11166 492 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 AKR1C3P42330 323 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 GNG4P50150 75 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 EMDP50402 254 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 FAM3BP58499 235 aaPredicted RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 SNRPNP63162 240 aaKnown RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 PRICKLE4Q2TBC4 344 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 CCSMST1Q4G0I0 132 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 RHOUQ7L0Q8 258 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 C12orf76Q8N812 135 aaPredicted RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 SUMF1Q8NBK3 374 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 OR51H1Q8NH63 302 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 GPR119Q8TDV5 335 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 MFRPQ9BY79 579 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 TMEM167BQ9NRX6 74 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 TBX21Q9UL17 535 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 LSM2Q9Y333 95 aaKnown RBP3.96□□□□□ -1.78
CHD9-201ENST00000219084 ASB1Q9Y576 335 aa3.96□□□□□ -1.78
CHD9-201ENST00000219084 TRGV10A0A0A0MS01 117 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 A0A1B0GU03 582 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 TNFSF14O43557 240 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 PITX3O75364 302 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 WISP3O95389 354 aaPredicted RBP3.95□□□□□ -1.78
CHD9-201ENST00000219084 CST2P09228 141 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 FSTP19883 344 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 CD96P40200 585 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 GNG3P63215 75 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 KLF9Q13886 244 aaPredicted RBP3.95□□□□□ -1.78
CHD9-201ENST00000219084 MPV17LQ2QL34 196 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 MUC20Q8N307 709 aaPredicted RBP3.95□□□□□ -1.78
CHD9-201ENST00000219084 NFAM1Q8NET5 270 aaPredicted RBP3.95□□□□□ -1.78
CHD9-201ENST00000219084 STXBP6Q8NFX7 210 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 FBXW5Q969U6 566 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 UQCC1Q9NVA1 299 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 RASL12Q9NYN1 266 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 RCL1Q9Y2P8 373 aaKnown RBP3.95□□□□□ -1.78
CHD9-201ENST00000219084 RLFQ13129 1914 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 DENND4CQ5VZ89 1909 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 AKR7A2O43488 359 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 ZFPL1O95159 310 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 SLC2A10O95528 541 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 NGFRP08138 427 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 EGR1P18146 543 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 SMAD4Q13485 552 aaKnown RBP3.95□□□□□ -1.78
CHD9-201ENST00000219084 PRSS36Q5K4E3 855 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 PRAMEF20Q5VT98 475 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 TMEM211Q6ICI0 200 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 THNSL2Q86YJ6 484 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 SPPL3Q8TCT6 385 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 C4orf45Q96LM5 186 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 TMEM147Q9BVK8 224 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 PRDM7Q9NQW5 492 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 HIF1ANQ9NWT6 349 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 WSB1Q9Y6I7 421 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 URGCP-MRPS24S4R325 110 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 RP1L1Q8IWN7 2480 aaPredicted RBP3.95□□□□□ -1.78
CHD9-201ENST00000219084 TMEM265A0A087WTH1 108 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 TEX50A0A1B0GTY4 177 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 RBFOX3A6NFN3 312 aa3.95□□□□□ -1.78
CHD9-201ENST00000219084 CDRT15L2A8MXV6 281 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms