RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 PISDQ9UG56 409 aa11.51□□□□□ -0.57
CTNS-201ENST00000046640 TMEM14DPA8MWL7 114 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 DHHO43323 396 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 GLRA1P23415 457 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 MLF1P58340 268 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 UBE2V2Q15819 145 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 SNAI3Q3KNW1 292 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 CLEC9AQ6UXN8 241 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 TIPARPQ7Z3E1 657 aaKnown RBP11.5□□□□□ -0.57
CTNS-201ENST00000046640 ZIC4Q8N9L1 334 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 CNTNAP3BQ96NU0 1288 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 SMIM3Q9BZL3 60 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 NELFAQ9H3P2 528 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 PIGLQ9Y2B2 252 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 DUS4LO95620 317 aaKnown RBP11.5□□□□□ -0.57
CTNS-201ENST00000046640 SERPINA5P05154 406 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 FCGR2AP12318 317 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 RCC1P18754 421 aaPredicted RBP11.5□□□□□ -0.57
CTNS-201ENST00000046640 NME2P22392 152 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 HOXA1P49639 335 aaPredicted RBP11.5□□□□□ -0.57
CTNS-201ENST00000046640 DUSP3P51452 185 aaPredicted RBP11.5□□□□□ -0.57
CTNS-201ENST00000046640 CHAF1BQ13112 559 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 KISS1Q15726 138 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 OR51T1Q8NGJ9 327 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 OR4A4PQ8NGN8 299 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 OR14K1Q8NGZ2 314 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 OR10C1Q96KK4 312 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 C1orf147Q96MC9 270 aaPredicted RBP11.5□□□□□ -0.57
CTNS-201ENST00000046640 C5orf66Q9H5L9 145 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 CRLF2Q9HC73 371 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 CXCL13O43927 109 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 ZNF205O95201 554 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 IL2RAP01589 272 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 P04436 131 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 B4GALT1P15291 398 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 KCNJ3P48549 501 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 SPINK14Q6IE38 97 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 ZNF529Q6P280 563 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 DRAM2Q6UX65 266 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 CLEC18BQ6UXF7 455 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 ETV3LQ6ZN32 361 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 DOK3Q7L591 496 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 BATF2Q8N1L9 274 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 ZDHHC22Q8N966 263 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 GJC3Q8NFK1 279 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 OR5T2Q8NGG2 359 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 M1APQ8TC57 530 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 ASB13Q8WXK3 278 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 ARL11Q969Q4 196 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 PTX4Q96A99 478 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 PADI1Q9ULC6 663 aa11.5□□□□□ -0.57
CTNS-201ENST00000046640 CCDC187A0A096LP49 1063 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 CBR3O75828 277 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 SUCLG1P53597 346 aaKnown RBP11.49□□□□□ -0.57
CTNS-201ENST00000046640 SRYQ05066 204 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 RAB32Q13637 225 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 PPP1R32Q7Z5V6 425 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 AKR7LQ8NHP1 331 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 TERB2Q8NHR7 220 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 NABP1Q96AH0 204 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 PHYHIPLQ96FC7 376 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 ESRP2Q9H6T0 727 aaKnown RBP11.49□□□□□ -0.57
CTNS-201ENST00000046640 MYOZ1Q9NP98 299 aaPredicted RBP11.49□□□□□ -0.57
CTNS-201ENST00000046640 TCFL5Q9UL49 500 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 A0A0A6YYH2 397 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 A6NJ64 397 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 M0R135 149 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 ANGPTL7O43827 346 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 AMY2BP19961 511 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 HOXA6P31267 233 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 CARD18P57730 90 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 GRB2P62993 217 aaKnown RBP11.49□□□□□ -0.57
CTNS-201ENST00000046640 ANKRD55Q3KP44 614 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 C9orf135Q5VTT2 229 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 ZNF774Q6NX45 483 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 RNF141Q8WVD5 230 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 TMEM230Q96A57 120 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 ZNF799Q96GE5 643 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 ARRDC1-AS1Q9H2J1 176 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 MOB1AQ9H8S9 216 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 CYTL1Q9NRR1 136 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 GPR173Q9NS66 373 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 DEPPQ9NTK1 212 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 LOXL2Q9Y4K0 774 aa11.49□□□□□ -0.57
CTNS-201ENST00000046640 OR3A2P47893 321 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 ZXDAP98168 799 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 HFEQ30201 348 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 DCAF12Q5T6F0 453 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 PGAP1Q75T13 922 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 SPAG16Q8N0X2 631 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 TMEM123Q8N131 208 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 KCNG3Q8TAE7 436 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 ZNF845Q96IR2 970 aaPredicted RBP11.48□□□□□ -0.57
CTNS-201ENST00000046640 PIGQQ9BRB3 760 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 NAA11Q9BSU3 229 aaPredicted RBP11.48□□□□□ -0.57
CTNS-201ENST00000046640 SLC2A8Q9NY64 477 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 ZNF581Q9P0T4 197 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 A0A087WZY1 265 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 PINLYPA6NC86 204 aa11.48□□□□□ -0.57
CTNS-201ENST00000046640 EIF1BO60739 113 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms