RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 SLC25A38Q96DW6 304 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 PARD6AQ9NPB6 346 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 PCNX3Q9H6A9 2034 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 SLC34A2O95436 690 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 ZNF32P17041 273 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 RPS16P62249 146 aaKnown RBP10.65□□□□□ -0.7
CHPF2-201ENST00000035307 LGALSLQ3ZCW2 172 aaPredicted RBP10.65□□□□□ -0.7
CHPF2-201ENST00000035307 CXorf67Q86X51 503 aaPredicted RBP10.65□□□□□ -0.7
CHPF2-201ENST00000035307 CMTM1Q8IZ96 169 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 LILRB2Q8N423 598 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 TMEM178AQ8NBL3 297 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 OR2M3Q8NG83 312 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 KCNE4Q8WWG9 221 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 TRAPPC2LQ9UL33 140 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 ST3GAL6Q9Y274 331 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 GTF3C1Q12789 2109 aa10.65□□□□□ -0.7
CHPF2-201ENST00000035307 MEIKINA0A087WXM9 373 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF587BE7ETH6 402 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 KLF7O75840 302 aaPredicted RBP10.65□□□□□ -0.71
CHPF2-201ENST00000035307 NRASP01111 189 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 OR5H8P0DN80 308 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 LIFP15018 202 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 FCGR2CP31995 323 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 HAAOP46952 286 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 GABRA2P47869 451 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 P2RX3P56373 397 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 ZFP82Q8N141 532 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF524Q96C55 264 aa10.65□□□□□ -0.71
CHPF2-201ENST00000035307 PCDHGA9Q9Y5G4 932 aaKnown RBP10.65□□□□□ -0.71
CHPF2-201ENST00000035307 PUS1Q9Y606 427 aaKnown RBP eCLIP10.65□□□□□ -0.71
CHPF2-201ENST00000035307 B8ZZF3 427 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 IGF2P01344 180 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 CHRM2P08172 466 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 CD63P08962 238 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 ASAH2BP0C7U1 165 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 DSCR4P56555 118 aaPredicted RBP10.64□□□□□ -0.71
CHPF2-201ENST00000035307 DCAF12L2Q5VW00 463 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 RNLSQ5VYX0 342 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 CD200R1LQ6Q8B3 271 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 OR9K2Q8NGE7 335 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 MS4A7Q9GZW8 240 aaPredicted RBP10.64□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF275Q9NSD4 429 aaPredicted RBP10.64□□□□□ -0.71
CHPF2-201ENST00000035307 DNAJB11Q9UBS4 358 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 CLDN16Q9Y5I7 305 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 CREBBPQ92793 2442 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 ANKRD20A5PA0PJZ0 165 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 MCRIP1C9JLW8 97 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 FTCDNL1E5RQL4 147 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 NME2P1O60361 137 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 CDH26Q8IXH8 852 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 C9orf62Q8N4C0 152 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 ZSCAN4Q8NAM6 433 aaPredicted RBP10.64□□□□□ -0.71
CHPF2-201ENST00000035307 CXorf58Q96LI9 332 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 PTTG3PQ9NZH4 202 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 A0A0D9SG52 128 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 PRR32B1ATL7 298 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 WDR1O75083 606 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 PCBD1P61457 104 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 KLF9Q13886 244 aaPredicted RBP10.64□□□□□ -0.71
CHPF2-201ENST00000035307 TMEM255AQ5JRV8 349 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 ZADH2Q8N4Q0 377 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 APH1AQ96BI3 265 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 SLCO5A1Q9H2Y9 848 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 FZR1Q9UM11 496 aa10.64□□□□□ -0.71
CHPF2-201ENST00000035307 TRAV39A0A0B4J263 110 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 LIPT2A6NK58 231 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 ZNF814B7Z6K7 855 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 KLF4O43474 513 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 CFDP00746 253 aaPredicted RBP10.63□□□□□ -0.71
CHPF2-201ENST00000035307 IFNA5P01569 189 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 PRKACAP17612 351 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 MST1P26927 711 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 PSMB6P28072 239 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 ALKBH6Q3KRA9 238 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 LINC01590Q5TEZ4 76 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 AADACL3Q5VUY0 350 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 SCARB1Q8WTV0 552 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 ST8SIA2Q92186 375 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 MS4A3Q96HJ5 214 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 AIFM2Q9BRQ8 373 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 HDHD3Q9BSH5 251 aaPredicted RBP10.63□□□□□ -0.71
CHPF2-201ENST00000035307 SOX7Q9BT81 388 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 MRPL22Q9NWU5 206 aaKnown RBP10.63□□□□□ -0.71
CHPF2-201ENST00000035307 CSPG4Q6UVK1 2322 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 LYZL6O75951 148 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 RPS27AP62979 156 aaKnown RBP10.63□□□□□ -0.71
CHPF2-201ENST00000035307 UBA52P62987 128 aaKnown RBP10.63□□□□□ -0.71
CHPF2-201ENST00000035307 IGLV3-21P80748 117 aaPredicted RBP10.63□□□□□ -0.71
CHPF2-201ENST00000035307 ARL6IP1Q15041 203 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 PLPPR5Q32ZL2 321 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 SHEQ5VZ18 495 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 KCNRGQ8N5I3 272 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 TMEM104Q8NE00 496 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 ASB10Q8WXI3 467 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 ZPBPQ9BS86 351 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 USP34Q70CQ2 3546 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 A0A0U1RQK1 487 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 ERVH48-1M5A8F1 160 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 UPK3AO75631 287 aa10.63□□□□□ -0.71
CHPF2-201ENST00000035307 TUSC2O75896 110 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms