RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Twsg1Q9EP52 222 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 ShhQ62226 437 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 PigvQ7TPN3 493 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Elfn1Q8C8T7 828 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr126Q8VGF0 319 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gpx8Q9D7B7 209 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gstk1Q9DCM2 226 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Dapp1Q9QXT1 280 aa9.25□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Foxa1P35582 468 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Emp1P47801 160 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Fmo1P50285 532 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Lhx4P53776 390 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Q80UB0 333 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 ShfQ8CG80 238 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Hus1bQ8K572 276 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Mmd2Q8R189 247 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr935Q8VG16 308 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr1270Q8VGP3 304 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Nova1Q9JKN6 507 aaKnown RBP9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Sema6cQ9WTM3 931 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Arpc1bQ9WV32 372 aaKnown RBP9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Ighv6-6A0A075B5T3 119 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vmn1r90A0A087WR36 309 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Trbv21A0A0A6YX06 97 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 D3Ertd254eA0A0G2JEM5 796 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm10271F6WY25 52 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Mtnd4lP03903 98 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Mmp2P33434 662 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Sumo1P63166 101 aaKnown RBP9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Insm1Q63ZV0 521 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr469Q8VF66 314 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Kcnj10Q9JM63 379 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Ank1Q02357 1862 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Kcnj15O88932 375 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Pcbp3P57722 371 aaKnown RBP9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 1700009N14RikQ14AA6 216 aaKnown RBP9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr1465Q7TQR2 307 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr1281Q7TQY6 305 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Enkd1Q7TSV9 346 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vstm5Q9D806 199 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vmn1r44Q9EQ47 310 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 StrapQ9Z1Z2 350 aaKnown RBP9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm13285B1AYI3 182 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm13275B1AYI8 182 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Rnf212bD3Z423 297 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr872E9PVW2 323 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr555E9Q547 315 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Dnmt3bO88509 859 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Zfp59P16373 634 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr18Q0VAX9 331 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cyb5d2Q5SSH8 263 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Trp53rkaQ5U452 244 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr843Q7TRG4 313 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 IfnzQ8BQT1 182 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Q8C5S3 137 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm13278Q8CD73 182 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Fahd1Q8R0F8 227 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Tp53rkQ99PW4 244 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Tctex1d2Q9CQ66 144 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cacna1sQ02789 1880 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Mtg2A2AFK4 405 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Bud31Q6PGH1 103 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Flrt1Q6RKD8 674 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Cstl1Q80Y72 140 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr790Q8VGJ3 322 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Hhipl2Q9D2G9 717 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Lmx1bO88609 395 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gdf9Q07105 441 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Pdlim5Q8CI51 591 aaKnown RBP9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 SdhaQ8K2B3 664 aaKnown RBP9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Tmem150bQ8R218 238 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Sgip1Q8VD37 806 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Mrps16Q9CPX7 135 aaKnown RBP9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Nudcd2Q9CQ48 157 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Mrps24Q9CQV5 167 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Eif1bQ9CXU9 113 aa9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 PrkraQ9WTX2 313 aaKnown RBP9.24□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vmn1r20K7N778 303 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 SrgnP13609 152 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Eif1P48024 113 aaKnown RBP9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 St6gal2Q76K27 524 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Dusp22Q99N11 184 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Pga5Q9D106 387 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Minpp1Q9Z2L6 481 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Gm21820J3KMU2 361 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Ypel5P62700 121 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Q24JP4 165 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Olfr1042Q7TR81 313 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Asphd2Q80VP9 343 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Exosc6Q8BTW3 273 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Phf19Q9CXG9 578 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 AplfQ9D842 499 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Slc23a2Q9EPR4 648 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Vmn1r91E9PZR7 307 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 P01881 257 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Hist1h1cP15864 212 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Il7rP16872 459 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 St8sia5P70126 412 aa9.23□□□□□ -0.93
Ubr1-201ENSMUST00000028728 Tcfl5Q32NY8 489 aa9.23□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms