RNA–Protein interactions for RNA: ENST00000639599.1

TARDBP-231, Transcript of TAR DNA binding protein, human

TSL 5

Gene TARDBP, Length 1,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TARDBP-231	ENST00000639599	RAP2A	P10114	183 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	GABRA5	P31644	462 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	SAA4	P35542	130 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	GPM6A	P51674	278 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	UBE2E1	P51965	193 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	PSMA6	P60900	246 aa	Known RBP	12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	EGR3	Q06889	387 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	ACSM1	Q08AH1	577 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	ATPAF1	Q5TC12	328 aa	Predicted RBP	12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	LCN8	Q6JVE9	175 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	PLBD1	Q6P4A8	553 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	OR5D13	Q8NGL4	314 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	OTOS	Q8NHW6	89 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	ZNF671	Q8TAW3	534 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	OR5P3	Q8WZ94	311 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	NIPSNAP1	Q9BPW8	284 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	WDR13	Q9H1Z4	485 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	C16orf95	Q9H693	158 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	RAB18	Q9NP72	206 aa		12.06	□□□□□ -0.48
TARDBP-231	ENST00000639599	OR2AT4	A6NND4	320 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	SIGLEC5	O15389	551 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	PRODH	O43272	600 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	ANGPTL7	O43827	346 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	SELENOF	O60613	162 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	HMGN1	P05114	100 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	SELL	P14151	372 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	MAP2K3	P46734	347 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	TGM4	P49221	684 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	GNG3	P63215	75 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	TRIM25	Q14258	630 aa	Known RBP	12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	DTX3	Q8N9I9	347 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	OR4C13	Q8NGP0	309 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	C8orf46	Q8TAG6	207 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	CCDC124	Q96CT7	223 aa	Known RBP	12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	DUS3L	Q96G46	650 aa	Known RBP	12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	CLPTM1L	Q96KA5	538 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	GAFA1	Q96PS6	74 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	FEV	Q99581	238 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	PPP1R3E	Q9H7J1	279 aa		12.05	□□□□□ -0.48
TARDBP-231	ENST00000639599	TRBV23-1	A0A0A0MS06	115 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	hCG_1809904	A0A1W2PP81	198 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599		A0A1W2PPE2	198 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599		A0A1W2PR64	198 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599		A0A1W2PRV1	198 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	TCRBV5S2	A0A599	114 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599		H3BUX3	64 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	FCN3	O75636	299 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	TSPAN9	O75954	239 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	TSPAN15	O95858	294 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	LGALS4	P56470	323 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	CAV3	P56539	151 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	KRTAP10-3	P60369	221 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	GINS1	Q14691	196 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	DGUOK	Q16854	277 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	CEP78	Q5JTW2	689 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	SLC35D3	Q5M8T2	416 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	LCN1P1	Q5VSP4	162 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	PLCXD3	Q63HM9	321 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	KCTD18	Q6PI47	426 aa	Predicted RBP	12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	CD300LD	Q6UXZ3	194 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	ZNF788	Q6ZQV5	615 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	C1orf122	Q6ZSJ8	110 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	PRSS45	Q7RTY3	260 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	OR8B12	Q8NGG6	310 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	NSL1	Q96IY1	281 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	AMELY	Q99218	206 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	MRO	Q9BYG7	248 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	VNN3	Q9NY84	501 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	ZNF319	Q9P2F9	582 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	GTF2A1L	Q9UNN4	478 aa		12.04	□□□□□ -0.48
TARDBP-231	ENST00000639599	ARRDC5	A6NEK1	342 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	ZNF732	B4DXR9	585 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	SLC1A7	O00341	560 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	ACAA1	P09110	424 aa	Predicted RBP	12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	ACKR3	P25106	362 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	DLX1	P56177	255 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	LY6E	Q16553	131 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	SMIM21	Q3B7S5	101 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	C11orf88	Q6PI97	169 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	MOB3C	Q70IA8	216 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	C1QL4	Q86Z23	238 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	PNKD	Q8N490	385 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599		Q8N7P7	452 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	OR2T6	Q8NHC8	308 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	ANGPTL6	Q8NI99	470 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	ASB9	Q96DX5	294 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	SSX3	Q99909	188 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	CHID1	Q9BWS9	393 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	C1orf21	Q9H246	121 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	YY1AP1	Q9H869	796 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	TAS2R1	Q9NYW7	299 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	LRP12	Q9Y561	859 aa		12.03	□□□□□ -0.48
TARDBP-231	ENST00000639599	TMEM269	A0A1B0GVZ9	245 aa		12.02	□□□□□ -0.49
TARDBP-231	ENST00000639599	OR5B21	A6NL26	309 aa		12.02	□□□□□ -0.49
TARDBP-231	ENST00000639599	MTRF1	O75570	445 aa	Known RBP	12.02	□□□□□ -0.49
TARDBP-231	ENST00000639599	TFF1	P04155	84 aa		12.02	□□□□□ -0.49
TARDBP-231	ENST00000639599	ATP6V1B1	P15313	513 aa		12.02	□□□□□ -0.49
TARDBP-231	ENST00000639599	HOXB6	P17509	224 aa	Known RBP	12.02	□□□□□ -0.49

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