RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 DSCR3O14972 297 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 PRRX1P54821 245 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 GDF7Q7Z4P5 450 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 ICAM5Q9UMF0 924 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 PSG11Q9UQ72 335 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 COL1A1P02452 1464 aaPredicted RBP17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 ZC3H12DA2A288 527 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 GAGE10A6NGK3 116 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 PAQR6Q6TCH4 344 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 FAM169BQ8N8A8 192 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 FZD9O00144 591 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 CADM3Q8N126 398 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 FADS6Q8N9I5 356 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 ST8SIA1Q92185 356 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 RBP4P02753 201 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 ELAVL1Q15717 326 aaKnown RBP17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 PRTGQ2VWP7 1150 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 TMEM81Q6P7N7 255 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 ST3GAL6Q9Y274 331 aa17.54■□□□□ 0.4
CACNA1A-257ENST00000638009 ALDOCP09972 364 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 CDX1P47902 265 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 ZNF260Q3ZCT1 412 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 GABARAPL3Q9BY60 117 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 PIPOXQ9P0Z9 390 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 C5orf49A4QMS7 147 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 CST5P28325 142 aaPredicted RBP17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 SYT14P1Q58G82 188 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 HES3Q5TGS1 186 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 A0A1B0GVG6 124 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 ARRB2P32121 409 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 CEACAM3P40198 252 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 MDGA1Q8NFP4 955 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 PCNPQ8WW12 178 aaKnown RBP17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 LINC01387J3KSC0 135 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 LANCL1O43813 399 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 C5P01031 1676 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 P01737 135 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 PVRP15151 417 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 PIGAP37287 484 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 LGALS7P47929 136 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 OR6C1Q96RD1 312 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 DHRS7CA6NNS2 312 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 LIPIQ6XZB0 460 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 OSTM1Q86WC4 334 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 A0A1B0GWA3 101 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 UBE2L6O14933 153 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 SLCO2B1O94956 709 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 RAG2P55895 527 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 ATP23Q9Y6H3 246 aa17.53■□□□□ 0.4
CACNA1A-257ENST00000638009 GP1BAP07359 652 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 SCMH1Q96GD3 660 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 R4GMQ9 66 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 NAT1P18440 290 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 CSNK1DP48730 415 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 TGIF2LXQ8IUE1 241 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 THOC3Q96J01 351 aaKnown RBP17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 LRRC3BQ96PB8 259 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 ZNF26P17031 533 aaPredicted RBP17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 OSR2Q8N2R0 312 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 ZNF480Q8WV37 535 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 TXNIPQ9H3M7 391 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 TAAR3PQ9P1P4 343 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 MAP1LC3B2A6NCE7 125 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 SELENOFO60613 162 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 CTF1Q16619 201 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 KHDC3LQ587J8 217 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 C19orf54Q5BKX5 351 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 TGIF2LYQ8IUE0 185 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 MAP1LC3BQ9GZQ8 125 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 DOK5Q9P104 306 aa17.52■□□□□ 0.4
CACNA1A-257ENST00000638009 TAF1P21675 1872 aa17.52■□□□□ 0.39
CACNA1A-257ENST00000638009 IL2RAP01589 272 aa17.52■□□□□ 0.39
CACNA1A-257ENST00000638009 EVX1P49640 407 aa17.52■□□□□ 0.39
CACNA1A-257ENST00000638009 D2HGDHQ8N465 521 aa17.52■□□□□ 0.39
CACNA1A-257ENST00000638009 OR2G2Q8NGZ5 317 aa17.52■□□□□ 0.39
CACNA1A-257ENST00000638009 DUSP21Q9H596 190 aa17.52■□□□□ 0.39
CACNA1A-257ENST00000638009 WNT7AO00755 349 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 GJB5O95377 273 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 APCDD1Q8J025 514 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 TMEM229BQ8NBD8 167 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 NRG4Q8WWG1 115 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 PLPP6Q8IY26 295 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 CA2P00918 260 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 ACSM6Q6P461 480 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 DOK4Q8TEW6 326 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 ZNF865P0CJ78 1059 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 CAMKMTQ7Z624 323 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 POM121Q96HA1 1249 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 IL36GQ9NZH8 169 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 NTNG1Q9Y2I2 539 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 ZNF25P17030 456 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 BRS3P32247 399 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 SYPL1Q16563 259 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 GAB4Q2WGN9 574 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 HSF5Q4G112 596 aaPredicted RBP17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 A0A1B0GX78 115 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 LNP1A1A4G5 178 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 SELENBP1Q13228 472 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 HDAC8Q9BY41 377 aa17.51■□□□□ 0.39
CACNA1A-257ENST00000638009 SMDT1Q9H4I9 107 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms