RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 SPAG17Q6Q759 2223 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 QDPRP09417 244 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 MUC1P15941 1255 aaPredicted RBP12.78□□□□□ -0.36
CLN6-215ENST00000636674 PAX6P26367 422 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 ADH6P28332 368 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 NUBP1P53384 320 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 CTAG1AP78358 180 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 GFOD2Q3B7J2 385 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 NKAIN1Q4KMZ8 207 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 FOXL2NBQ6ZUU3 175 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 SKA3Q8IX90 412 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 PP6455Q8WZ26 134 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 MICU1Q9BPX6 476 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 DECR2Q9NUI1 292 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 C1orf123Q9NWV4 160 aa12.78□□□□□ -0.36
CLN6-215ENST00000636674 PQLC2LA1A4F0 135 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 PRR33A8MZF0 331 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 DKK1O94907 266 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 HTR3BO95264 441 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 CD5P06127 495 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 HKR1P10072 659 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 ZNF43P17038 809 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 GLRA1P23415 457 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 CPT2P23786 658 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 PTGER4P35408 488 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 ZNF133P52736 654 aaPredicted RBP12.77□□□□□ -0.37
CLN6-215ENST00000636674 FADS6Q8N9I5 356 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 OR10G3Q8NGC4 313 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 C10orf35Q96D05 121 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 CYYR1Q96J86 154 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 LYZL4Q96KX0 146 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 OR5B2Q96R09 309 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 ST6GALNAC5Q9BVH7 336 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 CNTNAP3Q9BZ76 1288 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 CHST5Q9GZS9 411 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 METTL7AQ9H8H3 244 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 LMAN1LQ9HAT1 526 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 TAF9BQ9HBM6 251 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 PARP11Q9NR21 331 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 MYOTQ9UBF9 498 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 TUBD1Q9UJT1 453 aa12.77□□□□□ -0.37
CLN6-215ENST00000636674 C14orf166Q9Y224 244 aaKnown RBP12.77□□□□□ -0.37
CLN6-215ENST00000636674 A0A1W2PNR3 127 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 ZNF98A6NK75 572 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 ZNF726A6NNF4 738 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 E9PLN8 166 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 M0R296 226 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 SDCBPO00560 298 aaPredicted RBP12.76□□□□□ -0.37
CLN6-215ENST00000636674 DHRS3O75911 302 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 ZFAND5O76080 213 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 ONECUT2O95948 504 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 CST4P01036 141 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 IFNA2P01563 188 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 SRFP11831 508 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 ZNF708P17019 499 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 BLVRBP30043 206 aaPredicted RBP12.76□□□□□ -0.37
CLN6-215ENST00000636674 EIF1P41567 113 aaKnown RBP12.76□□□□□ -0.37
CLN6-215ENST00000636674 LPAR6P43657 344 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 RBM39Q14498 530 aaKnown RBP12.76□□□□□ -0.37
CLN6-215ENST00000636674 C10orf128Q5T292 105 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 CARD17Q5XLA6 110 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 RPL7L1Q6DKI1 246 aaKnown RBP12.76□□□□□ -0.37
CLN6-215ENST00000636674 BTNL8Q6UX41 500 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 C1QL2Q7Z5L3 287 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 SLC22A8Q8TCC7 542 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 PGAM5Q96HS1 289 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 LRFN3Q9BTN0 628 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 SLC7A5P2Q9GIP4 190 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 TMEM231Q9H6L2 316 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 OR2S2Q9NQN1 319 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 BIN3Q9NQY0 253 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 TLX3O43711 291 aaPredicted RBP12.76□□□□□ -0.37
CLN6-215ENST00000636674 MTRF1O75570 445 aaKnown RBP12.76□□□□□ -0.37
CLN6-215ENST00000636674 CTSDP07339 412 aaPredicted RBP12.76□□□□□ -0.37
CLN6-215ENST00000636674 FCGR3AP08637 254 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 OTX1P32242 354 aaPredicted RBP12.76□□□□□ -0.37
CLN6-215ENST00000636674 HIST1H3AP68431 136 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 ACY1Q03154 408 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 CHRFAM7AQ494W8 412 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 HIST2H3PS2Q5TEC6 136 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 HIST2H3AQ71DI3 136 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 SLC38A9Q8NBW4 561 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 LYPD6BQ8NI32 183 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 HAS2Q92819 552 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 SHDQ96IW2 340 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 HRH4Q9H3N8 390 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 ZNF318Q5VUA4 2279 aa12.76□□□□□ -0.37
CLN6-215ENST00000636674 NCOA6Q14686 2063 aaPredicted RBP12.75□□□□□ -0.37
CLN6-215ENST00000636674 FAM157AC9JC47 383 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 RNASEK-C17orf49H0YIS7 233 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 STMND1H3BQB6 276 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 RAMP1O60894 148 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 LRP3O75074 770 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 FBXO24O75426 580 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 HOXB5P09067 269 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 MSR1P21757 451 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 RBMXP38159 391 aaKnown RBP12.75□□□□□ -0.37
CLN6-215ENST00000636674 S100A10P60903 97 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 SLC35A1P78382 337 aa12.75□□□□□ -0.37
CLN6-215ENST00000636674 CPEB2Q7Z5Q1 589 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms