RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 SLC25A42Q86VD7 318 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 CXorf67Q86X51 503 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 LAX1Q8IWV1 398 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PKMYT1Q99640 499 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 NUDT16L1Q9BRJ7 211 aaKnown RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 TMUB1Q9BVT8 246 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 ADGRL4Q9HBW9 690 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 LYRM2Q9NU23 88 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 RBFOX1Q9NWB1 397 aaKnown RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 TRDV1A0A1B0GX56 115 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF815PA8K554 130 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 FAM157AC9JC47 383 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 TMPRSS2O15393 492 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 FZD6O60353 706 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 RPL12P30050 165 aaKnown RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 CALCRP30988 508 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 CCR9P51686 369 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 ANKRD34AQ69YU3 496 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 EBLN2Q6P2I7 272 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 C1orf210Q8IVY1 113 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 OR10V1Q8NGI7 309 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 OR1L3Q8NH93 324 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 VSTM2AQ8TAG5 236 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 SLC2A9Q9NRM0 540 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 GLRX2Q9NS18 164 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 TBC1D29Q9UFV1 150 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 DIMT1Q9UNQ2 313 aaKnown RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 RTTNQ86VV8 2226 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PF4V1P10720 104 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PTBP1P26599 531 aaKnown RBP eCLIP5.01□□□□□ -1.613e-7■■■■□ 20.5
SCN1A-209ENST00000635750 ARRB2P32121 409 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 HCCSP53701 268 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 JAG1P78504 1218 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 DUSP5Q16690 384 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 RSPO2Q6UXX9 243 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 BHLHA15Q7RTS1 189 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 SSX8Q7RTT4 187 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 NOXO1Q8NFA2 376 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 BAHD1Q8TBE0 780 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 Q8WTZ3 238 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 CXorf36Q9H7Y0 433 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 RABAC1Q9UI14 185 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 TRAPPC4Q9Y296 219 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 IGKV3-7A0A075B6H7 116 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 GIPP09681 153 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 CD1EP15812 388 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 ASCL1P50553 236 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 CCR6P51684 374 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 DUSP8Q13202 625 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 SRSF9Q13242 221 aaKnown RBP eCLIP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 FAM53BQ14153 422 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 PNLIPRP3Q17RR3 467 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 SLC26A10Q8NG04 563 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 OR4C16Q8NGL9 310 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 OR1F12Q8NHA8 337 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 ASB5Q8WWX0 329 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 WASHC3Q9Y3C0 194 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 NEURL4Q96JN8 1562 aa5.01□□□□□ -1.61
SCN1A-209ENST00000635750 COL3A1P02461 1466 aaPredicted RBP5.01□□□□□ -1.61
SCN1A-209ENST00000635750 KNL1Q8NG31 2342 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MBLAC1A4D2B0 266 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 GSTZ1O43708 216 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 KLF7O75840 302 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 HOXD13P35453 343 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 LIPAP38571 399 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MPLP40238 635 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SULT1A1P50225 295 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 RPEL1Q2QD12 228 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 XKR7Q5GH72 579 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 TMEM102Q8N9M5 508 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 GPR87Q9BY21 358 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 NKX6-2Q9C056 277 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 PRDM14Q9GZV8 571 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 CXXC4Q9H2H0 198 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 HEXA-AS1Q9H8Q6 139 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SH2D2AQ9NP31 389 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PCOLCE2Q9UKZ9 415 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SNX11Q9Y5W9 270 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 HIST1H1BP16401 226 aaKnown RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 ORM2P19652 201 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 VDAC1P21796 283 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PSMB6P28072 239 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 THBS4P35443 961 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 CAPZBP47756 277 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 ETFDHQ16134 617 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 TNXAQ16473 311 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SYT14P1Q58G82 188 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 ZNF519Q8TB69 540 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MED30Q96HR3 178 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 ADTRPQ96IZ2 230 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 OR10C1Q96KK4 312 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 MRGPRX3Q96LB0 322 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 GPR78Q96P69 363 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 PDLIM7Q9NR12 457 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 CTNNBIP1Q9NSA3 81 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 GDF2Q9UK05 429 aaPredicted RBP5□□□□□ -1.61
SCN1A-209ENST00000635750 KIAA1217Q5T5P2 1943 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 SCN1AP35498 2009 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 IGKV6-21A0A0C4DH24 114 aa5□□□□□ -1.61
SCN1A-209ENST00000635750 TO15178 435 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms