RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 RASSF4Q9H2L5 321 aa15.15■□□□□ 0.02
CLN6-210ENST00000635747 RIBC2Q9H4K1 309 aa15.15■□□□□ 0.02
CLN6-210ENST00000635747 SMURF1Q9HCE7 757 aa15.15■□□□□ 0.02
CLN6-210ENST00000635747 ENPP5Q9UJA9 477 aa15.15■□□□□ 0.02
CLN6-210ENST00000635747 ORC6Q9Y5N6 252 aa15.15■□□□□ 0.02
CLN6-210ENST00000635747 R4GMQ9 66 aa15.15■□□□□ 0.02
CLN6-210ENST00000635747 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.14■□□□□ 0.01
CLN6-210ENST00000635747 CLDN34H7C241 214 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 NDUFB3O43676 98 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 DHRS3O75911 302 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 OR2T7P0C7T2 308 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 GPM6AP51674 278 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 PDCD1Q15116 288 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 LRRC10Q5BKY1 277 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 WDR38Q5JTN6 314 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 BCL2L15Q5TBC7 163 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 OR51G2Q8NGK0 314 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 OR2T27Q8NH04 317 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 TRUB1Q8WWH5 349 aaKnown RBP15.14■□□□□ 0.01
CLN6-210ENST00000635747 PYDC1Q8WXC3 89 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 ST8SIA4Q92187 359 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 SLC25A28Q96A46 364 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 MED30Q96HR3 178 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 WDFY2Q96P53 400 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 CCL13Q99616 98 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 PCGF1Q9BSM1 259 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 TTTY10Q9BZA0 68 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 CNTD2Q9H8S5 307 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 OR52A1Q9UKL2 312 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 GTF2A1LQ9UNN4 478 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 PIGLQ9Y2B2 252 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 SNX5Q9Y5X3 404 aa15.14■□□□□ 0.01
CLN6-210ENST00000635747 IGHV3OR16-10A0A075B7F0 116 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 DNAJC9-AS1A6NH13 148 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 NKX6-3A6NJ46 265 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 SAC3D1A6NKF1 404 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 DHRS7CA6NNS2 312 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 PRR32B1ATL7 298 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 ZNF732B4DXR9 585 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 RRP9O43818 475 aaKnown RBP15.13■□□□□ 0.01
CLN6-210ENST00000635747 SRSF10O75494 262 aaKnown RBP15.13■□□□□ 0.01
CLN6-210ENST00000635747 NRASP01111 189 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 TTRP02766 147 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 KRT8P05787 483 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 ATP6V1E1P36543 226 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 POLR2IP36954 125 aaKnown RBP15.13■□□□□ 0.01
CLN6-210ENST00000635747 TGM4P49221 684 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 STUMQ69YW2 141 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 MOB3CQ70IA8 216 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 ELMOD2Q8IZ81 293 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 C3orf56Q8N813 242 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 ZNF48Q96MX3 618 aaPredicted RBP15.13■□□□□ 0.01
CLN6-210ENST00000635747 OR51I2Q9H344 312 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 RPUSD1Q9UJJ7 312 aaKnown RBP15.13■□□□□ 0.01
CLN6-210ENST00000635747 KPTNQ9Y664 436 aa15.13■□□□□ 0.01
CLN6-210ENST00000635747 MMP9P14780 707 aa15.12■□□□□ 0.01
CLN6-210ENST00000635747 CFPP27918 469 aa15.12■□□□□ 0.01
CLN6-210ENST00000635747 MFGE8Q08431 387 aaPredicted RBP15.12■□□□□ 0.01
CLN6-210ENST00000635747 FOXL1Q12952 345 aa15.12■□□□□ 0.01
CLN6-210ENST00000635747 CEP78Q5JTW2 689 aa15.12■□□□□ 0.01
CLN6-210ENST00000635747 ZNF684Q5T5D7 378 aa15.12■□□□□ 0.01
CLN6-210ENST00000635747 PLCXD3Q63HM9 321 aa15.12■□□□□ 0.01
CLN6-210ENST00000635747 GATAD2BQ8WXI9 593 aa15.12■□□□□ 0.01
CLN6-210ENST00000635747 IMPAD1Q9NX62 359 aa15.12■□□□□ 0.01
CLN6-210ENST00000635747 MRM2Q9UI43 246 aaKnown RBP15.12■□□□□ 0.01
CLN6-210ENST00000635747 DLGAP1O14490 977 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 AKR7A2O43488 359 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 SULT1C4O75897 302 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 RNASE1P07998 156 aaKnown RBP15.11■□□□□ 0.01
CLN6-210ENST00000635747 HKR1P10072 659 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 FAHP16930 419 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 GLRA1P23415 457 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 ARF6P62330 175 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 IL13RA1P78552 427 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 KPNB1Q14974 876 aaKnown RBP15.11■□□□□ 0.01
CLN6-210ENST00000635747 CDONQ4KMG0 1287 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 CLVS2Q5SYC1 327 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 ZNF788Q6ZQV5 615 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 Q6ZSR3 168 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 ZNF573Q86YE8 665 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 CMTM4Q8IZR5 234 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 YIPF7Q8N8F6 280 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 LY6G5BQ8NDX9 201 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 CCDC54Q8NEL0 328 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 ZDHHC16Q969W1 377 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 PPP1R14AQ96A00 147 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 FGF23Q9GZV9 251 aaPredicted RBP15.11■□□□□ 0.01
CLN6-210ENST00000635747 SIRPDQ9H106 197 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 WDR13Q9H1Z4 485 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 PRDM13Q9H4Q3 707 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 NOX4Q9NPH5 578 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 RASL12Q9NYN1 266 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 USE1Q9NZ43 259 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 NLKQ9UBE8 527 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.11■□□□□ 0.01
CLN6-210ENST00000635747 V9GYS6 101 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 TENM1Q9UKZ4 2725 aa15.11■□□□□ 0.01
CLN6-210ENST00000635747 A0A1B0GVI7 797 aa15.1■□□□□ 0.01
CLN6-210ENST00000635747 A0A1W2PQL4 384 aaPredicted RBP15.1■□□□□ 0.01
CLN6-210ENST00000635747 METTL15A6NJ78 407 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms