RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 TM4SF18Q96CE8 201 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 OTUB2Q96DC9 234 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TMA16Q96EY4 203 aaKnown RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 DNAJC1Q96KC8 554 aaKnown RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CAPZA3Q96KX2 299 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 HSFY1Q96LI6 401 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF641Q96N77 438 aaPredicted RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF607Q96SK3 696 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF382Q96SR6 550 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 FMO2Q99518 471 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 COPS8Q99627 209 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 NPAS2Q99743 824 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TMEM246Q9BRR3 403 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF670Q9BS34 389 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 GABARAPL3Q9BY60 117 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZYG11BQ9C0D3 744 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 DNTTIP1Q9H147 329 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 C20orf85Q9H1P6 137 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 FBXO44Q9H4M3 255 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF160Q9HCG1 818 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ADAP2Q9NPF8 381 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 LHX9Q9NQ69 397 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 RAB20Q9NX57 234 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 CALYQ9NYX4 217 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 IL37Q9NZH6 218 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 SPATA7Q9P0W8 599 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 DNAJC12Q9UKB3 198 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 PACSIN2Q9UNF0 486 aaPredicted RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 HS3ST2Q9Y278 367 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TIMM10BQ9Y5J6 103 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 N6AMT1Q9Y5N5 214 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 RYR3Q15413 4870 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 TNCP24821 2201 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 PRRC2CQ9Y520 2896 aaKnown RBP0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 BIRC6Q9NR09 4857 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 RYR2Q92736 4967 aa0.65□□□□□ -2.31
SMARCB1-209ENST00000635578 ALMS1Q8TCU4 4167 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 COL6A5A8TX70 2615 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TENM1Q9UKZ4 2725 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 EPPK1P58107 5090 aaKnown RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TRAV40A0A0B4J280 105 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 A0A0J9YYE9 177 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 MDFIC2A0A1B0GVS7 189 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 OR6C74A6NCV1 312 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TLCD2A6NGC4 264 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 GABRR3A8MPY1 467 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 EEF1E1-BLOC1S5C9J1V9 151 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 GOLGA8KD6RF30 607 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 H0YCG3 227 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 GOLGA8TH3BQL2 631 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PEX7O00628 323 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ARPC3O15145 178 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 BET1O15155 118 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 MAGEB3O15480 346 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 YKT6O15498 198 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 EEF1E1O43324 174 aaKnown RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF208O43345 1280 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TBX19O60806 448 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 DNAJB6O75190 326 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SPAG6O75602 509 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 RBBP9O75884 186 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PIAS1O75925 651 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 YEATS4O95619 227 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TNFP01375 233 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TRBC1P01850 177 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 GP1BAP07359 652 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 OR56A5P0C7T3 313 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 DBTP11182 482 aaKnown RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 COX6A1P12074 109 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 COX6B1P14854 86 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF14P17017 642 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 IGFBP3P17936 291 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 NPR2P20594 1047 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 MIPP30301 263 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SDC4P31431 198 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 HSD17B2P37059 387 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PTGDSP41222 190 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 MAP3K8P41279 467 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 GRIA1P42261 906 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 CA7P43166 264 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 MAGEA8P43361 318 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 PPT1P50897 306 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 RORCP51449 518 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 STC1P52823 247 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SUB1P53999 127 aaKnown RBP eCLIP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 CRISP3P54108 245 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ATP1B3P54709 279 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 CDH4P55283 916 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 CDH6P55285 790 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 VSX2P58304 361 aaPredicted RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 BPIFB3P59826 476 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TBPL1P62380 186 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 RPS21P63220 83 aaKnown RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ARG2P78540 354 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 MRPS25P82663 173 aaKnown RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 TNFRSF17Q02223 184 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 SLC25A11Q02978 314 aaKnown RBP0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ENPEPQ07075 957 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ZNF763Q0D2J5 394 aa0.64□□□□□ -2.31
SMARCB1-209ENST00000635578 ELP6Q0PNE2 266 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms