RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 DLGAP1O14490 977 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 CASQ2O14958 399 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-209ENST00000635450 SYT7O43581 403 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 WNT2P09544 360 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 FAHP16930 419 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 GATA3P23771 443 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 CD80P33681 288 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 GNB2P62879 340 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 GNG3P63215 75 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 CSNK2BP67870 215 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 RAB40BQ12829 278 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 ODF4Q2M2E3 257 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 CDONQ4KMG0 1287 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 KLHL22Q53GT1 634 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 CEP78Q5JTW2 689 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 OGFRL1Q5TC84 451 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF691Q5VV52 312 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 PLCXD3Q63HM9 321 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 SFRP4Q6FHJ7 346 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-209ENST00000635450 WDR86Q86TI4 376 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 C19orf18Q8NEA5 215 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 CCDC54Q8NEL0 328 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF418Q8TF45 676 aaPredicted RBP12.99□□□□□ -0.33
LINC00339-209ENST00000635450 LRRC29Q8WV35 223 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 PLEKHA1Q9HB21 404 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 ACOXLQ9NUZ1 547 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 V9GYS6 101 aa12.99□□□□□ -0.33
LINC00339-209ENST00000635450 A0A0A6YYJ9 748 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 DHRS7CA6NNS2 312 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 A8MXK9 166 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 J3QLW9 94 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 CDIPTO14735 213 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 NDUFA2O43678 99 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 CLIC3O95833 236 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 NRASP01111 189 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 HTR1AP08908 422 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 UBCP0CG48 685 aaKnown RBP12.98□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF12P17014 697 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF19P17023 458 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 PSMB10P40306 273 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 GPM6AP51674 278 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 OR12D2P58182 307 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 ISL1P61371 349 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 IL18R1Q13478 541 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 CEACAM21Q3KPI0 293 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 KLF17Q5JT82 389 aaPredicted RBP12.98□□□□□ -0.33
LINC00339-209ENST00000635450 CLVS2Q5SYC1 327 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 WDR82Q6UXN9 313 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 KRT74Q7RTS7 529 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 LHFPL3Q86UP9 236 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 GCSAMQ8N6F7 178 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 ZDHHC22Q8N966 263 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 OR5A2Q8NGI9 324 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 OR14K1Q8NGZ2 314 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 APH1BQ8WW43 257 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 HPSE2Q8WWQ2 592 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 RPL3LQ92901 407 aaKnown RBP12.98□□□□□ -0.33
LINC00339-209ENST00000635450 C4orf36Q96KX1 117 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 ALG8Q9BVK2 526 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 SSBP3Q9BWW4 388 aaPredicted RBP12.98□□□□□ -0.33
LINC00339-209ENST00000635450 TLNRD1Q9H1K6 362 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 INPP5EQ9NRR6 644 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 OR5V1Q9UGF6 321 aa12.98□□□□□ -0.33
LINC00339-209ENST00000635450 PPIAL4CA0A0B4J2A2 164 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 A0A1B0GTI1 187 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 OR5B21A6NL26 309 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 ZNF732B4DXR9 585 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 LHBP01229 141 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 CCL1P22362 96 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 CFPP27918 469 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 PITPNBP48739 271 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 ACTG1P63261 375 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 ADARB1P78563 741 aaKnown RBP12.97□□□□□ -0.33
LINC00339-209ENST00000635450 SLC34A1Q06495 639 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 GALEQ14376 348 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 MICBQ29980 383 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 WDR38Q5JTN6 314 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 TMEM244Q5VVB8 128 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 C11orf53Q8IXP5 236 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 BCL6BQ8N143 479 aaPredicted RBP12.97□□□□□ -0.33
LINC00339-209ENST00000635450 SCCPDHQ8NBX0 429 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 OR52I1Q8NGK6 324 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 OR10Z1Q8NGY1 313 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 NANPQ8TBE9 248 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 MRPS18AQ9NVS2 196 aaKnown RBP12.97□□□□□ -0.33
LINC00339-209ENST00000635450 ERVK-18Q9QC07 812 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 CLN8Q9UBY8 286 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 MYRFQ9Y2G1 1151 aa12.97□□□□□ -0.33
LINC00339-209ENST00000635450 POLR3KQ9Y2Y1 108 aaPredicted RBP12.97□□□□□ -0.33
LINC00339-209ENST00000635450 SOX21Q9Y651 276 aaPredicted RBP12.97□□□□□ -0.33
LINC00339-209ENST00000635450 IRGMA1A4Y4 181 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 H0YAE9 185 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 H0YHG0 523 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 H3BSH0 61 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 ADAM20O43506 726 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 WBP4O75554 376 aaKnown RBP12.96□□□□□ -0.33
LINC00339-209ENST00000635450 IGHA1P01876 353 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 MUC1P15941 1255 aaPredicted RBP12.96□□□□□ -0.33
LINC00339-209ENST00000635450 EGR1P18146 543 aa12.96□□□□□ -0.33
LINC00339-209ENST00000635450 CFHR2P36980 270 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms