RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 ACOT9Q9Y305 439 aa1.09□□□□□ -2.23
SRP54-214ENST00000630962 COMMD3-BMI1R4GMX3 469 aa1.09□□□□□ -2.23
SRP54-214ENST00000630962 LOXHD1Q8IVV2 1947 aa1.09□□□□□ -2.24
SRP54-214ENST00000630962 TENM1Q9UKZ4 2725 aa1.09□□□□□ -2.24
SRP54-214ENST00000630962 LOC102724200A0A096LPH7 203 aaPredicted RBP1.08□□□□□ -2.24
SRP54-214ENST00000630962 IGKV1-6A0A0C4DH72 117 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 IGLL5B9A064 214 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 C9JQL5 133 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 ERI3O43414 337 aaKnown RBP1.08□□□□□ -2.24
SRP54-214ENST00000630962 LCA5LO95447 670 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 CD160O95971 181 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 CSRP1P21291 193 aaKnown RBP1.08□□□□□ -2.24
SRP54-214ENST00000630962 OR1G1P47890 313 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 UQCRFS1P47985 274 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 ADIGQ0VDE8 80 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 OR1Q1Q15612 314 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 LIN9Q5TKA1 542 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 TMEM236Q5W0B7 351 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 SLC22A9Q8IVM8 553 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 BPIFB6Q8NFQ5 453 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 ORAOV1Q8WV07 137 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.08□□□□□ -2.24
SRP54-214ENST00000630962 MCUR1Q96AQ8 359 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 C20orf166-AS1Q96NR2 134 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 UCK2Q9BZX2 261 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 VWA8A3KMH1 1905 aa1.08□□□□□ -2.24
SRP54-214ENST00000630962 BAZ1BQ9UIG0 1483 aaKnown RBP1.07□□□□□ -2.24
SRP54-214ENST00000630962 SYNJ2BP-COX16A0A087WUM0 186 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 CACNG3O60359 315 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 AGTP01019 485 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 IGKV1-39P01597 117 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 IGHMP01871 453 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 HLA-HP01893 362 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 IGKV1D-39P04432 117 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 OR4Q2P0C623 313 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 PTHLHP12272 177 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 PRPS1L1P21108 318 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 STOMP27105 288 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 RAB11AP62491 216 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 GABRG1Q8N1C3 465 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 FAM81AQ8TBF8 368 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 JSRP1Q96MG2 331 aaPredicted RBP1.07□□□□□ -2.24
SRP54-214ENST00000630962 ZNF75AQ96N20 296 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 CHP1Q99653 195 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 ZNF160Q9HCG1 818 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 RBFOX1Q9NWB1 397 aaKnown RBP1.07□□□□□ -2.24
SRP54-214ENST00000630962 MCUBQ9NWR8 336 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 ZNF257Q9Y2Q1 563 aa1.07□□□□□ -2.24
SRP54-214ENST00000630962 FCGBPQ9Y6R7 5405 aaPredicted RBP1.07□□□□□ -2.24
SRP54-214ENST00000630962 KCNE1BA0A087WTH5 132 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 IGHV6-1A0A0B4J1U7 121 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 GOLGA8OA6NCC3 632 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 GGTLC3B5MD39 225 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 GOLGA8NF8WBI6 632 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 XRCC2O43543 280 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 CDH16O75309 829 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 ENTPD6O75354 484 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 ZNF708P17019 499 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 TAS2R39P59534 338 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 RPS15AP62244 130 aaKnown RBP1.06□□□□□ -2.24
SRP54-214ENST00000630962 DEFB103AP81534 67 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 ZNF33AQ06730 810 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 INCA1Q0VD86 236 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 ZNF181Q2M3W8 571 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 TRMT5Q32P41 509 aaKnown RBP1.06□□□□□ -2.24
SRP54-214ENST00000630962 KRTAP25-1Q3LHN0 102 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 BEX5Q5H9J7 111 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 STEAP4Q687X5 459 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 TWF2Q6IBS0 349 aaKnown RBP1.06□□□□□ -2.24
SRP54-214ENST00000630962 RAB43Q86YS6 212 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 ZFP62Q8NB50 900 aaPredicted RBP1.06□□□□□ -2.24
SRP54-214ENST00000630962 OR10Z1Q8NGY1 313 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 ITFG1Q8TB96 612 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 ZNF606Q8WXB4 792 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 OR5P3Q8WZ94 311 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 RBPMSQ93062 196 aaKnown RBP1.06□□□□□ -2.24
SRP54-214ENST00000630962 APH1AQ96BI3 265 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 RNF170Q96K19 258 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 NAPGQ99747 312 aaPredicted RBP1.06□□□□□ -2.24
SRP54-214ENST00000630962 UQCC2Q9BRT2 126 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 ABCB9Q9NP78 766 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 RCL1Q9Y2P8 373 aaKnown RBP1.06□□□□□ -2.24
SRP54-214ENST00000630962 UBN2Q6ZU65 1347 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 NINLQ9Y2I6 1382 aa1.06□□□□□ -2.24
SRP54-214ENST00000630962 LTBP2Q14767 1821 aa1.05□□□□□ -2.24
SRP54-214ENST00000630962 LEUTXA8MZ59 168 aa1.05□□□□□ -2.24
SRP54-214ENST00000630962 EIF3HO15372 352 aaKnown RBP eCLIP1.05□□□□□ -2.24
SRP54-214ENST00000630962 MLNP12872 115 aa1.05□□□□□ -2.24
SRP54-214ENST00000630962 HLA-GP17693 338 aa1.05□□□□□ -2.24
SRP54-214ENST00000630962 TAGLN2P37802 199 aaKnown RBP1.05□□□□□ -2.24
SRP54-214ENST00000630962 TUFMP49411 452 aaKnown RBP1.05□□□□□ -2.24
SRP54-214ENST00000630962 GRB2P62993 217 aaKnown RBP1.05□□□□□ -2.24
SRP54-214ENST00000630962 HMGN5P82970 282 aaKnown RBP1.05□□□□□ -2.24
SRP54-214ENST00000630962 ENDOGQ14249 297 aaKnown RBP1.05□□□□□ -2.24
SRP54-214ENST00000630962 SPANXN2Q5MJ10 180 aa1.05□□□□□ -2.24
SRP54-214ENST00000630962 OR2T5Q6IEZ7 315 aa1.05□□□□□ -2.24
SRP54-214ENST00000630962 ZNF322Q6U7Q0 402 aaPredicted RBP1.05□□□□□ -2.24
SRP54-214ENST00000630962 TMEM25Q86YD3 366 aa1.05□□□□□ -2.24
SRP54-214ENST00000630962 APRG1Q8IVJ8 170 aa1.05□□□□□ -2.24
SRP54-214ENST00000630962 OR8K1Q8NGG5 319 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms