RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 C19orf12Q9NSK7 152 aa16.26■□□□□ 0.19
TARDBP-228ENST00000629725 CD300AQ9UGN4 299 aa16.26■□□□□ 0.19
TARDBP-228ENST00000629725 IGKV1D-17A0A075B6S4 117 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 A0A1W2PPH5 198 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 DHRS12A0PJE2 317 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 ZNF850A8MQ14 1090 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 SLC22A2O15244 555 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 APOC1P02654 83 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 IFNGR2P38484 337 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 PRDX4Q13162 271 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 PLA1AQ53H76 456 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 TEX30Q5JUR7 227 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 PRSS45Q7RTY3 260 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 TMEM219Q86XT9 240 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 FAM86B1Q8N7N1 296 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 ZNF511Q8NB15 262 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 RNF170Q96K19 258 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 KCTD14Q9BQ13 255 aaPredicted RBP16.25■□□□□ 0.19
TARDBP-228ENST00000629725 OR10A2Q9H208 303 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 ABCB9Q9NP78 766 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 ABCB10Q9NRK6 738 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 DNAJC27Q9NZQ0 273 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 PITPNC1Q9UKF7 332 aa16.25■□□□□ 0.19
TARDBP-228ENST00000629725 SAMD4AQ9UPU9 718 aaKnown RBP16.25■□□□□ 0.19
TARDBP-228ENST00000629725 hCG_1809904A0A1W2PP81 198 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 A0A1W2PPE2 198 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 A0A1W2PR64 198 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 A0A1W2PRV1 198 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 PSG2P11465 335 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 COX7A1P24310 79 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 GSSP48637 474 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 CAPZA1P52907 286 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 ZNF121P58317 390 aaPredicted RBP16.24■□□□□ 0.19
TARDBP-228ENST00000629725 KRTAP10-11P60412 298 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 LHFPL4Q7Z7J7 247 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 C11orf42Q8N5U0 333 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 OR52L1Q8NGH7 329 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 RP9Q8TA86 221 aaKnown RBP16.24■□□□□ 0.19
TARDBP-228ENST00000629725 RCC1LQ96I51 464 aaKnown RBP16.24■□□□□ 0.19
TARDBP-228ENST00000629725 EGLN3Q9H6Z9 239 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 DCAF13Q9NV06 445 aaKnown RBP16.24■□□□□ 0.19
TARDBP-228ENST00000629725 ZNF319Q9P2F9 582 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 ZNF222Q9UK12 451 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 LRP12Q9Y561 859 aa16.24■□□□□ 0.19
TARDBP-228ENST00000629725 A6NDX4 124 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 FAM90A8PA6NJQ4 464 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 RHBDL1O75783 438 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 PF4P02776 101 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 GYPBP06028 91 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 DCTDP32321 178 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 VDAC2P45880 294 aaPredicted RBP16.23■□□□□ 0.19
TARDBP-228ENST00000629725 RPL31P62899 125 aaKnown RBP16.23■□□□□ 0.19
TARDBP-228ENST00000629725 CD83Q01151 205 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 TSPAN31Q12999 210 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 EIF2B1Q14232 305 aaKnown RBP16.23■□□□□ 0.19
TARDBP-228ENST00000629725 TIGD4Q8IY51 512 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 DYNAPQ8N1N2 210 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 SLC37A3Q8NCC5 494 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 RPS4Y2Q8TD47 263 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 GNPDA2Q8TDQ7 276 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 PIGCQ92535 297 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 RGCCQ9H4X1 137 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 BRD7Q9NPI1 651 aa16.23■□□□□ 0.19
TARDBP-228ENST00000629725 NDUFAB1O14561 156 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 DUS4LO95620 317 aaKnown RBP16.22■□□□□ 0.19
TARDBP-228ENST00000629725 CST4P01036 141 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 COX4I1P13073 169 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 ACKR3P25106 362 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 ERVFRD-1P60508 538 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 TMEM200BQ69YZ2 307 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 GLYATQ6IB77 296 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 C8orf82Q6P1X6 216 aaPredicted RBP16.22■□□□□ 0.19
TARDBP-228ENST00000629725 Q6ZS46 218 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 OR5AU1Q8NGC0 362 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 OR6K6Q8NGW6 343 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 HPSE2Q8WWQ2 592 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 SDSLQ96GA7 329 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 PGAM5Q96HS1 289 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 B9D2Q9BPU9 175 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 FGF23Q9GZV9 251 aaPredicted RBP16.22■□□□□ 0.19
TARDBP-228ENST00000629725 YY1AP1Q9H869 796 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 USE1Q9NZ43 259 aa16.22■□□□□ 0.19
TARDBP-228ENST00000629725 ALDOBP05062 364 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 SLC25A1P53007 311 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 BLCAPP62952 87 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 TMEM95Q3KNT9 176 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 RPL13AP3Q6NVV1 102 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 THAP5Q7Z6K1 395 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 ZDHHC23Q8IYP9 409 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 HIST1H2AAQ96QV6 131 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 MUC13Q9H3R2 512 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 CCDC134Q9H6E4 229 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 CDH10Q9Y6N8 788 aa16.21■□□□□ 0.19
TARDBP-228ENST00000629725 E9PQ18 207 aa16.2■□□□□ 0.18
TARDBP-228ENST00000629725 GPM6AP51674 278 aa16.2■□□□□ 0.18
TARDBP-228ENST00000629725 SSX2Q16385 188 aa16.2■□□□□ 0.18
TARDBP-228ENST00000629725 ZNF782Q6ZMW2 699 aaPredicted RBP16.2■□□□□ 0.18
TARDBP-228ENST00000629725 RNF133Q8WVZ7 376 aa16.2■□□□□ 0.18
TARDBP-228ENST00000629725 FOXRED1Q96CU9 486 aaPredicted RBP16.2■□□□□ 0.18
TARDBP-228ENST00000629725 MALSU1Q96EH3 234 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms