RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 NR4A2P43354 598 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 KIR2DL3P43628 341 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 DEFA1P59665 94 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 DEFA3P59666 94 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 OR8B8Q15620 311 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 C2orf76Q3KRA6 126 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 PYHIN1Q6K0P9 492 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 BAIAP2L2Q6UXY1 529 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 Q8N402 240 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 CHPT1Q8WUD6 406 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 HAVCR1Q96D42 359 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 C1orf147Q96MC9 270 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 FAM210AQ96ND0 272 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 CNTD2Q9H8S5 307 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 OBP2BQ9NPH6 170 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 RHBDL2Q9NX52 303 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 CRIM1Q9NZV1 1036 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 RABL2AQ9UBK7 228 aaPredicted RBP8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 RABL2BQ9UNT1 228 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 ITPR3Q14573 2671 aa8.18□□□□□ -1.1
PDLIM5-223ENST00000627587 TMEM272A0A1B0GTI8 110 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 A0A1W2PQ09 198 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 J3QW42 95 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 LANCL1O43813 399 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 GOSR1O95249 250 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 HLA-DQB1P01920 261 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 GSK3AP49840 483 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 IDH3GP51553 393 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 QRFPP83859 136 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 PITPNAQ00169 270 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 SCN1BQ07699 218 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 TMEM42Q69YG0 159 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 BHLHA15Q7RTS1 189 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 FAM222BQ8WU58 562 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 MBD6Q96DN6 1003 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 OPA3Q9H6K4 179 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 NEK6Q9HC98 313 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 SPG11Q96JI7 2443 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 HEATR1Q9H583 2144 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 A0A0G2JNJ9 132 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 MSTNO14793 375 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 SSX4O60224 188 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 IGKV3-15P01624 115 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 CBR1P16152 277 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 HOXB4P17483 251 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 BMP5P22003 454 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 IL32P24001 234 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 GK2Q14410 553 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 DAZAP2Q15038 168 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 OXA1LQ15070 435 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 CNN3Q15417 329 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 TRIM16LQ309B1 348 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 TMEM69Q5SWH9 247 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 CLVS2Q5SYC1 327 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 ZBTB37Q5TC79 503 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 TRIQKQ629K1 86 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 OR10K2Q6IF99 312 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 Q6ZNX1 250 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 DCDC5Q6ZRR9 648 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 RFPL4BQ6ZWI9 263 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 MRPL21Q7Z2W9 205 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 IZUMO1Q8IYV9 350 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 PNLDC1Q8NA58 520 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 POC5Q8NA72 575 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 OR5L1Q8NGL2 311 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 UBASH3BQ8TF42 649 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 TRIM63Q969Q1 353 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 PHF21AQ96BD5 680 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 GPER1Q99527 375 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 REPIN1Q9BWE0 567 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 PIGMQ9H3S5 423 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 CDH20Q9HBT6 801 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 TBCCD1Q9NVR7 557 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 EIF3KQ9UBQ5 218 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 ZNF629Q9UEG4 869 aaPredicted RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 Q9UFV3 132 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 MRPS7Q9Y2R9 242 aaKnown RBP8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 AMDHD2Q9Y303 409 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 STARD10Q9Y365 291 aa8.17□□□□□ -1.1
PDLIM5-223ENST00000627587 IGKV1-27A0A075B6S5 117 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 ZNF816-ZNF321PA0A0X1KG74 233 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 OR5H1A6NKK0 313 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 EEF1E1-BLOC1S5C9J1V9 151 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 EEF1E1O43324 174 aaKnown RBP8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 ICMTO60725 284 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 KDM4BO94953 1096 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 PTH2RP49190 550 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 INPP1P49441 399 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 UNC119Q13432 240 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 HLXQ14774 488 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 KISS1Q15726 138 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 AWAT2Q6E213 333 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 CENPSQ8N2Z9 138 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 MINDY2Q8NBR6 621 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 C19orf18Q8NEA5 215 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 SETD6Q8TBK2 473 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 NPRL2Q8WTW4 380 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 SPSB1Q96BD6 273 aa8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 CPNE2Q96FN4 548 aaPredicted RBP8.16□□□□□ -1.1
PDLIM5-223ENST00000627587 CLEC4MQ9H2X3 399 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms