RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 ZNF671Q8TAW3 534 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 TFAP2CQ92754 450 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 NEIL1Q96FI4 390 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 OR8B2Q96RD0 313 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 BEX2Q9BXY8 128 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 COMMD4Q9H0A8 199 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 AMBNQ9NP70 447 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 HHLA2Q9UM44 414 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 DIMT1Q9UNQ2 313 aaKnown RBP11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 SLC7A11Q9UPY5 501 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 POLDIP2Q9Y2S7 368 aa11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 POLR3KQ9Y2Y1 108 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 CAB39Q9Y376 341 aaPredicted RBP11.76□□□□□ -0.53
SNRPA1-216ENST00000626000 A0A1B0GTI1 187 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 LOC107986453A0A1B0GWG9 222 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 ANKRD61A6NGH8 418 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 CEACAM18A8MTB9 384 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 F5H0A9 414 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 P2RY10O00398 339 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 WNT9BO14905 357 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 MAGEB4O15481 346 aaPredicted RBP11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 FAHP16930 419 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 OR12D2P58182 307 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 CNN3Q15417 329 aaKnown RBP11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 LHFPL3Q86UP9 236 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 OR14K1Q8NGZ2 314 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 PELI1Q96FA3 418 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 TMEM80Q96HE8 168 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 CHST5Q9GZS9 411 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 TMEM165Q9HC07 324 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 PLCXD1Q9NUJ7 323 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 HIF1ANQ9NWT6 349 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 OR5V1Q9UGF6 321 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 MYRFQ9Y2G1 1151 aa11.75□□□□□ -0.53
SNRPA1-216ENST00000626000 MALRD1Q5VYJ5 2156 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 SRRM5B3KS81 715 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 FAM157AC9JC47 383 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 CLIC3O95833 236 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 LHBP01229 141 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 FAM157CP0CG43 387 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 THBS2P35442 1172 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 PMELP40967 661 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 GNB2P62879 340 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 ALKBH1Q13686 389 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 WDR82Q6UXN9 313 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 MOB3CQ70IA8 216 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 PRSS35Q8N3Z0 413 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 ZNF676Q8N7Q3 588 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 OR52N1Q8NH53 320 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 CNIH3Q8TBE1 160 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 FBLIM1Q8WUP2 373 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 LRRC29Q8WV35 223 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 HPSE2Q8WWQ2 592 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 DVL3Q92997 716 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 TMEM246Q9BRR3 403 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 SSBP3Q9BWW4 388 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 DCAF16Q9NXF7 216 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 ERVK-18Q9QC07 812 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 NKX1-2Q9UD57 310 aaPredicted RBP11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 AASSQ9UDR5 926 aa11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 FN1P02751 2386 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 SONP18583 2426 aaKnown RBP11.74□□□□□ -0.53
SNRPA1-216ENST00000626000 IGHV3-64DA0A0J9YX35 117 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 ZNF732B4DXR9 585 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 GPR37O15354 613 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 PLPP2O43688 288 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 WNT2P09544 360 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 OCM2P0CE71 109 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 OCMP0CE72 109 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 ZNF20P17024 532 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 NF1P21359 2839 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 PRKACBP22694 351 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 PITPNBP48739 271 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 GPM6AP51674 278 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 TAS2R43P59537 309 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 CR1LQ2VPA4 569 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 FAM120AOSQ5T036 256 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 DCAF12L2Q5VW00 463 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 CD276Q5ZPR3 534 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 BTNL3Q6UXE8 466 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 UTS2BQ765I0 119 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 ZNF771Q7L3S4 317 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 SLC36A1Q7Z2H8 476 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 WDR86Q86TI4 376 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 FAM90A1Q86YD7 464 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 GCSAMQ8N6F7 178 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 SCCPDHQ8NBX0 429 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 DNAAF1Q8NEP3 725 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 SPSB1Q96BD6 273 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 CPNE2Q96FN4 548 aaPredicted RBP11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 ABCA2Q9BZC7 2435 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 OR51I2Q9H344 312 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 SCN3BQ9NY72 215 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 RASL12Q9NYN1 266 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 FRRS1LQ9P0K9 344 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 KAAG1Q9UBP8 84 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 CLN8Q9UBY8 286 aa11.73□□□□□ -0.53
SNRPA1-216ENST00000626000 NKX6-3A6NJ46 265 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms